RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 CHI3L1P36222 383 aaPredicted RBP11.37□□□□□ -0.59
SLIRP-209ENST00000557342 MRPL19P49406 292 aaKnown RBP11.37□□□□□ -0.59
SLIRP-209ENST00000557342 ANXA11P50995 505 aaKnown RBP11.37□□□□□ -0.59
SLIRP-209ENST00000557342 POLR2JP52435 117 aaKnown RBP11.37□□□□□ -0.59
SLIRP-209ENST00000557342 DGKQP52824 942 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 DSCR4P56555 118 aaPredicted RBP11.37□□□□□ -0.59
SLIRP-209ENST00000557342 TXNL4AP83876 142 aaKnown RBP11.37□□□□□ -0.59
SLIRP-209ENST00000557342 GANABQ14697 944 aaKnown RBP11.37□□□□□ -0.59
SLIRP-209ENST00000557342 SF3B4Q15427 424 aaKnown RBP eCLIP11.37□□□□□ -0.59
SLIRP-209ENST00000557342 EIPR1Q53HC9 387 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 EMC4Q5J8M3 183 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 WIPI1Q5MNZ9 446 aaPredicted RBP11.37□□□□□ -0.59
SLIRP-209ENST00000557342 DCST2Q5T1A1 773 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 ZNF585AQ6P3V2 769 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 MSANTD1Q6ZTZ1 278 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 MRGPRGQ86SM5 289 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 IFNEQ86WN2 208 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 MISPQ8IVT2 679 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 FADS6Q8N9I5 356 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 ZNF527Q8NB42 609 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 OR5M9Q8NGP3 310 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 OR14L1PQ8NHC6 308 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 MIPOL1Q8TD10 442 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 DUSP19Q8WTR2 217 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 ITLN2Q8WWU7 325 aaPredicted RBP11.37□□□□□ -0.59
SLIRP-209ENST00000557342 MARK4Q96L34 752 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 DMRTA2Q96SC8 542 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 SLC35A5Q9BS91 424 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 RMND5AQ9H871 391 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 EXD2Q9NVH0 621 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 TAS2R10Q9NYW0 307 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 DKKL1Q9UK85 242 aa11.37□□□□□ -0.59
SLIRP-209ENST00000557342 A0A1W2PQD3 144 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 FAM234BA2RU67 622 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 CCDC154A6NI56 674 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 AHRRA9YTQ3 701 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 C9JVG2 144 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 RFXANKO14593 260 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 ADAM10O14672 748 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 NDUFB5O43674 189 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 EDF1O60869 148 aaKnown RBP11.36□□□□□ -0.59
SLIRP-209ENST00000557342 OXSR1O95747 527 aaPredicted RBP11.36□□□□□ -0.59
SLIRP-209ENST00000557342 ANGPTL1O95841 491 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 GP1BBP13224 206 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 DPP4P27487 766 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 MSX1P28360 303 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 ADORA2A-AS1P86434 159 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 CRYZQ08257 329 aaKnown RBP11.36□□□□□ -0.59
SLIRP-209ENST00000557342 STX5Q13190 355 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 CCNJQ5T5M9 372 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 ATAD3BQ5T9A4 648 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 SAXO2Q658L1 398 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 VASNQ6EMK4 673 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 OR5M10Q6IEU7 315 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 AAGABQ6PD74 315 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 ENPP6Q6UWR7 440 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 C3P1Q6ZMU1 363 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 MAMDC2Q7Z304 686 aaPredicted RBP11.36□□□□□ -0.59
SLIRP-209ENST00000557342 YRDCQ86U90 279 aaKnown RBP11.36□□□□□ -0.59
SLIRP-209ENST00000557342 MARCH3Q86UD3 253 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 CLEC4FQ8N1N0 589 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 OR2M3Q8NG83 312 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 OR5D16Q8NGK9 328 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 OR4C3Q8NH37 302 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 ABTB1Q969K4 478 aaPredicted RBP11.36□□□□□ -0.59
SLIRP-209ENST00000557342 NEURL3Q96EH8 262 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 TIMP4Q99727 224 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 EBF4Q9BQW3 602 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 DSN1Q9H410 356 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 TMEM45AQ9NWC5 275 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 COQ3Q9NZJ6 369 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 PLEKHB1Q9UF11 243 aaPredicted RBP11.36□□□□□ -0.59
SLIRP-209ENST00000557342 FBXL2Q9UKC9 423 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 SLC6A5Q9Y345 797 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 HRH3Q9Y5N1 445 aa11.36□□□□□ -0.59
SLIRP-209ENST00000557342 IGLV3-32A0A0A0MS00 114 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 A1L4Q6 167 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 CYSRT1A8MQ03 144 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 FAM47E-STBD1D6RA91 191 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 ANP32DO95626 131 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 BMP7P18075 431 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 CHMP24386 653 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 MAGEA8P43361 318 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 KHKP50053 298 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 ATP4BP51164 291 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 RPS26P62854 115 aaKnown RBP11.35□□□□□ -0.59
SLIRP-209ENST00000557342 ART3Q13508 389 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 ARHGAP11BQ3KRB8 267 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 FLYWCH1Q4VC44 716 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 C1orf185Q5T7R7 199 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 B3GNT6Q6ZMB0 384 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 ZNF621Q6ZSS3 439 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 C16orf62Q7Z3J2 963 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 GALNT10Q86SR1 603 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 CHDHQ8NE62 594 aaPredicted RBP11.35□□□□□ -0.59
SLIRP-209ENST00000557342 RND1Q92730 232 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 ITCHQ96J02 903 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 SFXN2Q96NB2 322 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 SDF2Q99470 211 aa11.35□□□□□ -0.59
SLIRP-209ENST00000557342 UGT2B28Q9BY64 529 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms