RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 ZW10O43264 779 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 IDH3BO43837 385 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 SEC22BO75396 215 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 CCNKO75909 580 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 VNN2O95498 520 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 TSPAN12O95859 305 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 C9P02748 559 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 KLKB1P03952 638 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 OR4Q2P0C623 313 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 HAPLN1P10915 354 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-246ENST00000557030 PPIBP23284 216 aaKnown RBP4.4□□□□□ -1.71
ATXN3-246ENST00000557030 RPS3P23396 243 aaKnown RBP eCLIP4.4□□□□□ -1.71
ATXN3-246ENST00000557030 DGKAP23743 735 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 PRDX3P30048 256 aaKnown RBP4.4□□□□□ -1.71
ATXN3-246ENST00000557030 FMO3P31513 532 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 KRT20P35900 424 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 CDKN2AP42771 156 aaKnown RBP4.4□□□□□ -1.71
ATXN3-246ENST00000557030 MAGEA11P43364 429 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 MAP2K4P45985 399 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 DAPP51397 102 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 IST1P53990 364 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 CLDN8P56748 225 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 COPZ1P61923 177 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 NCS1P62166 190 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 RPS14P62263 151 aaKnown RBP4.4□□□□□ -1.71
ATXN3-246ENST00000557030 CACNG1Q06432 222 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 ZNF33BQ06732 778 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 DSC1Q08554 894 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 SREBF2Q12772 1141 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 DGCR6Q14129 220 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 IHHQ14623 411 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 MS4A13Q5J8X5 152 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 TPRG1LQ5T0D9 272 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 SDHAF4Q5VUM1 108 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 AGAP6Q5VW22 663 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 LYPLAL1Q5VWZ2 237 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 TMEM268Q5VZI3 342 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 TMEM236Q5W0B7 351 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 FAHD1Q6P587 224 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 TMEM71Q6P5X7 295 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 SCIMPQ6UWF3 145 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 GCNT7Q6ZNI0 430 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 EIF3MQ7L2H7 374 aaKnown RBP4.4□□□□□ -1.71
ATXN3-246ENST00000557030 ZNF367Q7RTV3 350 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 SLC46A3Q7Z3Q1 461 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-246ENST00000557030 SERPINA11Q86U17 422 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 WDR5BQ86VZ2 330 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 TRIM69Q86WT6 500 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 PGBD5Q8N414 524 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 LIX1Q8N485 282 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 SIDT2Q8NBJ9 832 aaKnown RBP4.4□□□□□ -1.71
ATXN3-246ENST00000557030 OR4F6Q8NGB9 312 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 OR4K2Q8NGD2 314 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 GRPEL2Q8TAA5 225 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 EEF1AKMT1Q8WVE0 214 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 OIT3Q8WWZ8 545 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 ST8SIA4Q92187 359 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 SGCDQ92629 289 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 TESCQ96BS2 214 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 ULK4Q96C45 1275 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 TMCO6Q96DC7 493 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 RNFT2Q96EX2 444 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 RPRD1AQ96P16 312 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-246ENST00000557030 AGAP4Q96P64 663 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 FRG2BQ96QU4 278 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 EPYCQ99645 322 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 C19orf43Q9BQ61 176 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 CHCHD6Q9BRQ6 235 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 NTMT1Q9BV86 223 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 GABARAPL3Q9BY60 117 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 REEP1Q9H902 201 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 SIAEQ9HAT2 523 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 RDH14Q9HBH5 336 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 LRTM1Q9HBL6 345 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 NEK6Q9HC98 313 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 IL1RAPQ9NPH3 570 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 DYRK4Q9NR20 520 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 IL37Q9NZH6 218 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 OPTCQ9UBM4 332 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 UBA2Q9UBT2 640 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-246ENST00000557030 CD207Q9UJ71 328 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 CFL2Q9Y281 166 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 TRAPPC4Q9Y296 219 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 WBP11Q9Y2W2 641 aaKnown RBP4.4□□□□□ -1.71
ATXN3-246ENST00000557030 DHRS7Q9Y394 339 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 SAMHD1Q9Y3Z3 626 aaKnown RBP4.4□□□□□ -1.71
ATXN3-246ENST00000557030 NEUROG3Q9Y4Z2 214 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 OARD1Q9Y530 152 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 KLK4Q9Y5K2 254 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 LYVE1Q9Y5Y7 322 aa4.4□□□□□ -1.71
ATXN3-246ENST00000557030 PLXNA3P51805 1871 aa4.39□□□□□ -1.71
ATXN3-246ENST00000557030 UNC80Q8N2C7 3258 aa4.39□□□□□ -1.71
ATXN3-246ENST00000557030 CLEC18AA5D8T8 446 aa4.39□□□□□ -1.71
ATXN3-246ENST00000557030 GAGE12JA6NER3 117 aa4.39□□□□□ -1.71
ATXN3-246ENST00000557030 FAM90A7PA6NKC0 464 aa4.39□□□□□ -1.71
ATXN3-246ENST00000557030 PDZK1P1A8MUH7 402 aa4.39□□□□□ -1.71
ATXN3-246ENST00000557030 FAM90A22PA8MWA6 464 aa4.39□□□□□ -1.71
ATXN3-246ENST00000557030 FAM90A12PA8MX19 464 aa4.39□□□□□ -1.71
ATXN3-246ENST00000557030 FAM90A23PA8MXZ1 464 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms