RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 TMEM201Q5SNT2 666 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 GRTP1Q5TC63 336 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 GTF2IRD2BQ6EKJ0 949 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 MFSD12Q6NUT3 480 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 GALNT10Q86SR1 603 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 GTF2IRD2Q86UP8 949 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 DTX2Q86UW9 622 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 ZNF525Q8N782 197 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 PPM1NQ8N819 430 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 OR2V1Q8NHB1 315 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 RHEBL1Q8TAI7 183 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 PIWIL2Q8TC59 973 aaKnown RBP12.4□□□□□ -0.42
ACTN1-219ENST00000556432 FAM168AQ92567 244 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 REXO5Q96IC2 774 aaKnown RBP12.4□□□□□ -0.42
ACTN1-219ENST00000556432 POTEKPQ9BYX7 375 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 RTN4RQ9BZR6 473 aa12.4□□□□□ -0.42
ACTN1-219ENST00000556432 FAM120CQ9NX05 1096 aaKnown RBP12.4□□□□□ -0.42
ACTN1-219ENST00000556432 DPRXA6NFQ7 191 aa12.39□□□□□ -0.43
ACTN1-219ENST00000556432 FAM159BA6NKW6 160 aa12.39□□□□□ -0.43
ACTN1-219ENST00000556432 OR7A17O14581 309 aa12.39□□□□□ -0.43
ACTN1-219ENST00000556432 SPRY1O43609 319 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-219ENST00000556432 GCM2O75603 506 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-219ENST00000556432 IGHV4-31P0DP07 118 aa12.39□□□□□ -0.43
ACTN1-219ENST00000556432 IGFBP5P24593 272 aa12.39□□□□□ -0.43
ACTN1-219ENST00000556432 IRX1P78414 480 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-219ENST00000556432 GALNT1Q10472 559 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-219ENST00000556432 RAB35Q15286 201 aa12.39□□□□□ -0.43
ACTN1-219ENST00000556432 PDSS1Q5T2R2 415 aa12.39□□□□□ -0.43
ACTN1-219ENST00000556432 SFRP5Q5T4F7 317 aa12.39□□□□□ -0.43
ACTN1-219ENST00000556432 HBMQ6B0K9 141 aa12.39□□□□□ -0.43
ACTN1-219ENST00000556432 FAM166AQ6J272 317 aa12.39□□□□□ -0.43
ACTN1-219ENST00000556432 KLC3Q6P597 504 aa12.39□□□□□ -0.43
ACTN1-219ENST00000556432 DNAJC14Q6Y2X3 702 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-219ENST00000556432 GABRG1Q8N1C3 465 aa12.39□□□□□ -0.43
ACTN1-219ENST00000556432 C1orf52Q8N6N3 182 aaKnown RBP12.39□□□□□ -0.43
ACTN1-219ENST00000556432 SLC9A6Q92581 669 aa12.39□□□□□ -0.43
ACTN1-219ENST00000556432 PLA2G12AQ9BZM1 189 aa12.39□□□□□ -0.43
ACTN1-219ENST00000556432 FARSBQ9NSD9 589 aaKnown RBP12.39□□□□□ -0.43
ACTN1-219ENST00000556432 FREM1Q5H8C1 2179 aa12.39□□□□□ -0.43
ACTN1-219ENST00000556432 ELOA3DA6NLF2 546 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-219ENST00000556432 KIAA0513O60268 411 aa12.38□□□□□ -0.43
ACTN1-219ENST00000556432 COQ9O75208 318 aa12.38□□□□□ -0.43
ACTN1-219ENST00000556432 ADAP00813 363 aa12.38□□□□□ -0.43
ACTN1-219ENST00000556432 PABPC4LP0CB38 370 aaKnown RBP12.38□□□□□ -0.43
ACTN1-219ENST00000556432 ZNF17P17021 662 aa12.38□□□□□ -0.43
ACTN1-219ENST00000556432 USF1P22415 310 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-219ENST00000556432 ELOA3BQ3SY89 546 aa12.38□□□□□ -0.43
ACTN1-219ENST00000556432 CYP27C1Q4G0S4 372 aa12.38□□□□□ -0.43
ACTN1-219ENST00000556432 FAM120AOSQ5T036 256 aa12.38□□□□□ -0.43
ACTN1-219ENST00000556432 TFAP2EQ6VUC0 442 aa12.38□□□□□ -0.43
ACTN1-219ENST00000556432 C3orf62Q6ZUJ4 267 aa12.38□□□□□ -0.43
ACTN1-219ENST00000556432 BHLHA15Q7RTS1 189 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-219ENST00000556432 EXOC3L1Q86VI1 746 aa12.38□□□□□ -0.43
ACTN1-219ENST00000556432 SAMD14Q8IZD0 417 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-219ENST00000556432 FAM9CQ8IZT9 166 aa12.38□□□□□ -0.43
ACTN1-219ENST00000556432 CENPLQ8N0S6 344 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-219ENST00000556432 PTGR2Q8N8N7 351 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-219ENST00000556432 ELOA3Q8NG57 546 aa12.38□□□□□ -0.43
ACTN1-219ENST00000556432 OR7G2Q8NG99 324 aa12.38□□□□□ -0.43
ACTN1-219ENST00000556432 OR2W6PQ8NHA6 318 aa12.38□□□□□ -0.43
ACTN1-219ENST00000556432 SELENOMQ8WWX9 145 aa12.38□□□□□ -0.43
ACTN1-219ENST00000556432 GRIP2Q9C0E4 1043 aa12.38□□□□□ -0.43
ACTN1-219ENST00000556432 Q9N2J8 555 aa12.38□□□□□ -0.43
ACTN1-219ENST00000556432 NMRK1Q9NWW6 199 aa12.38□□□□□ -0.43
ACTN1-219ENST00000556432 MRTO4Q9UKD2 239 aaKnown RBP12.38□□□□□ -0.43
ACTN1-219ENST00000556432 POU2F3Q9UKI9 436 aa12.38□□□□□ -0.43
ACTN1-219ENST00000556432 SNX12Q9UMY4 172 aa12.38□□□□□ -0.43
ACTN1-219ENST00000556432 LOC100289279A0A1B0GTE1 492 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 SHISA9B4DS77 424 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 ABCD4O14678 606 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 UTS2O95399 124 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 ANGPTL1O95841 491 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 PDYNP01213 254 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 PGRP06401 933 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 IL3P08700 152 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 GZMKP49863 264 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 PSMD4P55036 377 aaKnown RBP12.37□□□□□ -0.43
ACTN1-219ENST00000556432 TRA2BP62995 288 aaKnown RBP12.37□□□□□ -0.43
ACTN1-219ENST00000556432 LSM11P83369 360 aaKnown RBP eCLIP12.37□□□□□ -0.43
ACTN1-219ENST00000556432 PSG6Q00889 435 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 C17orf67Q0P5P2 114 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 ACAP2Q15057 778 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 PPA1Q15181 289 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 ZNHIT3Q15649 155 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-219ENST00000556432 TMEM44Q2T9K0 475 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 ESPNLQ6ZVH7 1005 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 NUFIP2Q7Z417 695 aaKnown RBP12.37□□□□□ -0.43
ACTN1-219ENST00000556432 FBXL14Q8N1E6 418 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 PIAS4Q8N2W9 510 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-219ENST00000556432 SLC35F6Q8N357 371 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 ABHD3Q8WU67 409 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 OSTF1Q92882 214 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 MUCL1Q96DR8 90 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 PHF21BQ96EK2 531 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 ADGRG7Q96K78 797 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 RNF145Q96MT1 663 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 NSUN5Q96P11 429 aaKnown RBP12.37□□□□□ -0.43
ACTN1-219ENST00000556432 BBS4Q96RK4 519 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 HBEGFQ99075 208 aa12.37□□□□□ -0.43
ACTN1-219ENST00000556432 USB1Q9BQ65 265 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms