RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 EXO1Q9UQ84 846 aaKnown RBP4.79□□□□□ -1.64
TMEM260-210ENST00000556422 ELOVL7A1L3X0 281 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 EPOPA6NHQ4 379 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 MYO1GB0I1T2 1018 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 ERN1O75460 977 aaKnown RBP4.79□□□□□ -1.64
TMEM260-210ENST00000556422 H6PDO95479 791 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 NFATC1O95644 943 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 RAP2AP10114 183 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 NPPBP16860 134 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 IGFBP5P24593 272 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 MSX1P28360 303 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 DRD3P35462 400 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 PBX2P40425 430 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 P2RY2P41231 377 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 PER3P56645 1201 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 PMP22Q01453 160 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 TEKQ02763 1124 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 PUM1Q14671 1186 aaKnown RBP eCLIP4.79□□□□□ -1.64
TMEM260-210ENST00000556422 EIF4HQ15056 248 aaKnown RBP4.79□□□□□ -1.64
TMEM260-210ENST00000556422 TOMM34Q15785 309 aaPredicted RBP4.79□□□□□ -1.64
TMEM260-210ENST00000556422 CATSPEREQ5SY80 951 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 KHDRBS2Q5VWX1 349 aaKnown RBP4.79□□□□□ -1.64
TMEM260-210ENST00000556422 TANGO2Q6ICL3 276 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 TMEM81Q6P7N7 255 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 GCNT7Q6ZNI0 430 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 SLCO4C1Q6ZQN7 724 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 FAM83HQ6ZRV2 1179 aaPredicted RBP4.79□□□□□ -1.64
TMEM260-210ENST00000556422 PGAP1Q75T13 922 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 PXKQ7Z7A4 578 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 ZC3H7AQ8IWR0 971 aaKnown RBP4.79□□□□□ -1.64
TMEM260-210ENST00000556422 OR5M1Q8NGP8 315 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 NETO1Q8TDF5 533 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 C16orf78Q8WTQ4 265 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 KCNE4Q8WWG9 221 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 KAT2AQ92830 837 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 LINC00615Q96LM1 132 aaPredicted RBP4.79□□□□□ -1.64
TMEM260-210ENST00000556422 MED18Q9BUE0 208 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 ZCCHC4Q9H5U6 513 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 VPS29Q9UBQ0 182 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.79□□□□□ -1.64
TMEM260-210ENST00000556422 ZNF451Q9Y4E5 1061 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 NINQ8N4C6 2090 aa4.79□□□□□ -1.64
TMEM260-210ENST00000556422 A0A087X0M5 115 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 A0A1B0GX30 115 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 METTL15A6NJ78 407 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 FAM220BPB1ANY3 271 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 TMEM238C9JI98 176 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 CXCR6O00574 342 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 OIP5O43482 229 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 NUDT21O43809 227 aaKnown RBP4.78□□□□□ -1.64
TMEM260-210ENST00000556422 CATP04040 527 aaKnown RBP4.78□□□□□ -1.64
TMEM260-210ENST00000556422 IFNA4P05014 189 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 PCCBP05166 539 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 ALPLP05186 524 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 OR8G3PP0DMU2 310 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 DTYMKP23919 212 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 RPS9P46781 194 aaKnown RBP4.78□□□□□ -1.64
TMEM260-210ENST00000556422 ANXA11P50995 505 aaKnown RBP4.78□□□□□ -1.64
TMEM260-210ENST00000556422 CLCNKAP51800 687 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 CRYBA2P53672 197 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 TAS2R38P59533 333 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 MAP4K2Q12851 820 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 ARL6IP1Q15041 203 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 OXA1LQ15070 435 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 FAM214AQ32MH5 1076 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 OR2B11Q5JQS5 317 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 PIP5KL1Q5T9C9 394 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 ATG9BQ674R7 924 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 ZNF767PQ75MW2 155 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 TRAPPC5Q8IUR0 188 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 CFAP206Q8IYR0 622 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 HS3ST5Q8IZT8 346 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 OR2C3Q8N628 320 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 FAM169BQ8N8A8 192 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 TMEM145Q8NBT3 493 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 NUDT10Q8NFP7 164 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 CSGALNACT1Q8TDX6 532 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 CHTF18Q8WVB6 975 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 LIPHQ8WWY8 451 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 OR8D1Q8WZ84 308 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 TMBIM1Q969X1 311 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 MARVELD3Q96A59 401 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 COX14Q96I36 57 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 MAPKAP1Q9BPZ7 522 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 ZFYVE21Q9BQ24 234 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 SGPP1Q9BX95 441 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 MROQ9BYG7 248 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 PLA2G2FQ9BZM2 168 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 SFXN1Q9H9B4 322 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 BRF2Q9HAW0 419 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 PRSS16Q9NQE7 514 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 DCAF13Q9NV06 445 aaKnown RBP4.78□□□□□ -1.64
TMEM260-210ENST00000556422 GLS2Q9UI32 602 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 COLQQ9Y215 455 aaPredicted RBP4.78□□□□□ -1.64
TMEM260-210ENST00000556422 COL4A2P08572 1712 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 A0A0A6YYH2 397 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 A6NJ64 397 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 TMX2-CTNND1H3BSU7 103 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 SCGB2A1O75556 95 aa4.78□□□□□ -1.64
TMEM260-210ENST00000556422 ZFPL1O95159 310 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms