RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 PSMB5P28074 263 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 ART1P52961 327 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 ENTPD8Q5MY95 495 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 PAQR6Q6TCH4 344 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 ZNF550Q7Z398 422 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 WDR53Q7Z5U6 358 aaPredicted RBP14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 ZNF527Q8NB42 609 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 SMPDL3BQ92485 455 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 TM9SF4Q92544 642 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 RAB7BQ96AH8 199 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 NEURL3Q96EH8 262 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 NECTIN4Q96NY8 510 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 ZDHHC4Q9NPG8 344 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 SIRT5Q9NXA8 310 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 SCP2D1Q9UJQ7 156 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 ZAR1LA6NP61 321 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 ALDOBP05062 364 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 KCNJ5P48544 419 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 CTBSQ01459 385 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 C6orf132Q5T0Z8 1188 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 METTL11BQ5VVY1 283 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 FAM71E1Q6IPT2 247 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 PARS2Q7L3T8 475 aaKnown RBP14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 OR52D1Q9H346 318 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 TREM1Q9NP99 234 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 ACSS1Q9NUB1 689 aaPredicted RBP14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 HS3ST2Q9Y278 367 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 KCNK2O95069 426 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 SYN1P17600 705 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 POLR2CP19387 275 aaPredicted RBP14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 IGFBP4P22692 258 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 GAS6Q14393 721 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 RSPO2Q6UXX9 243 aaPredicted RBP14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 TMEM173Q86WV6 379 aaPredicted RBP14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 RBM45Q8IUH3 476 aaKnown RBP14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 GALNT11Q8NCW6 608 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 ZMYND19Q96E35 227 aaPredicted RBP14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 C4orf36Q96KX1 117 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 QRSL1Q9H0R6 528 aaKnown RBP14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 A4GALTQ9NPC4 353 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 HPF1Q9NWY4 346 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 QSER1Q2KHR3 1735 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 RBMS1P29558 406 aaKnown RBP14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 OR3A3P47888 321 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 YBX1P67809 324 aaKnown RBP14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 MBTPS1Q14703 1052 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 TMEM17Q86X19 198 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 PDZD9Q8IXQ8 264 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 PHOSPHO1Q8TCT1 267 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 TMEM239Q8WW34 195 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 OPALINQ96PE5 141 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 OR2M2Q96R28 347 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 OR6C2Q9NZP2 312 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 OR1A2Q9Y585 309 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 NOX1Q9Y5S8 564 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 H7C2Y5 167 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 RNF13O43567 381 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 ICMTO60725 284 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 B4GALT2O60909 372 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 ACOT4Q8N9L9 421 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 OR2A12Q8NGT7 310 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 C1QTNF2Q9BXJ5 285 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 MVB12BQ9H7P6 319 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 GFYI3L273 518 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 ARPC1BO15143 372 aaKnown RBP14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 FCN2Q15485 313 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 OCLNQ16625 522 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 ZNF385BQ569K4 471 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 PRRT3Q5FWE3 981 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 MEPCEQ7L2J0 689 aaKnown RBP14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 RTN4RL1Q86UN2 441 aaPredicted RBP14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 LRRC56Q8IYG6 542 aaPredicted RBP14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 TMIEQ8NEW7 156 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 PPP1R14AQ96A00 147 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 SGTBQ96EQ0 304 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 MS4A4EQ96PG1 132 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 TMEM184CQ9NVA4 438 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 SH2B3Q9UQQ2 575 aa14.13□□□□□ -0.15
ARHGEF40-207ENST00000556399 C13orf42A0A1B0GVH6 325 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 TMEM202A6NGA9 273 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 ARPC5O15511 151 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 GKN3PP0CG01 181 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 CREB3L2Q70SY1 520 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 OR2L2Q8NH16 312 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 OR5J2Q8NH18 312 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 TMEM185BQ9H7F4 350 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 CENPMQ9NSP4 180 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 NDUFB11Q9NX14 153 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 ETV5P41161 510 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 TGM4P49221 684 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 ETV1P50549 477 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 ZMAT1Q5H9K5 638 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 RNASE11Q8TAA1 199 aaKnown RBP14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 OR7D2Q96RA2 312 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 PKMYT1Q99640 499 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 PLEKHA1Q9HB21 404 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 TLR9Q9NR96 1032 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 DOCK1Q14185 1865 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 UBR3Q6ZT12 1888 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 SCDO00767 359 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms