RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 METTL21CQ5VZV1 264 aa8.8□□□□□ -1
SRP54-210ENST00000556380 BHLHB9Q6PI77 547 aa8.8□□□□□ -1
SRP54-210ENST00000556380 FIGNL1Q6PIW4 674 aa8.8□□□□□ -1
SRP54-210ENST00000556380 ANGPTL8Q6UXH0 198 aa8.8□□□□□ -1
SRP54-210ENST00000556380 MSANTD1Q6ZTZ1 278 aa8.8□□□□□ -1
SRP54-210ENST00000556380 SZRD1Q7Z422 152 aa8.8□□□□□ -1
SRP54-210ENST00000556380 SPPL2CQ8IUH8 684 aa8.8□□□□□ -1
SRP54-210ENST00000556380 GHDCQ8N2G8 530 aa8.8□□□□□ -1
SRP54-210ENST00000556380 OR4C3Q8NH37 302 aa8.8□□□□□ -1
SRP54-210ENST00000556380 CDS1Q92903 461 aa8.8□□□□□ -1
SRP54-210ENST00000556380 RELTQ969Z4 430 aa8.8□□□□□ -1
SRP54-210ENST00000556380 VPS33AQ96AX1 596 aa8.8□□□□□ -1
SRP54-210ENST00000556380 ZNF597Q96LX8 424 aa8.8□□□□□ -1
SRP54-210ENST00000556380 OR7D2Q96RA2 312 aa8.8□□□□□ -1
SRP54-210ENST00000556380 OSBPL11Q9BXB4 747 aa8.8□□□□□ -1
SRP54-210ENST00000556380 FGFR1OP2Q9NVK5 253 aa8.8□□□□□ -1
SRP54-210ENST00000556380 ERRFI1Q9UJM3 462 aaPredicted RBP8.8□□□□□ -1
SRP54-210ENST00000556380 MRTO4Q9UKD2 239 aaKnown RBP8.8□□□□□ -1
SRP54-210ENST00000556380 FAF1Q9UNN5 650 aaPredicted RBP8.8□□□□□ -1
SRP54-210ENST00000556380 ABCG2Q9UNQ0 655 aa8.8□□□□□ -1
SRP54-210ENST00000556380 C15orf41Q9Y2V0 281 aa8.8□□□□□ -1
SRP54-210ENST00000556380 WIF1Q9Y5W5 379 aa8.8□□□□□ -1
SRP54-210ENST00000556380 LIPGQ9Y5X9 500 aa8.8□□□□□ -1
SRP54-210ENST00000556380 DOPEY2Q9Y3R5 2298 aa8.8□□□□□ -1
SRP54-210ENST00000556380 MYO7BQ6PIF6 2116 aa8.8□□□□□ -1
SRP54-210ENST00000556380 MED12Q93074 2177 aa8.79□□□□□ -1
SRP54-210ENST00000556380 IGLV3-32A0A0A0MS00 114 aa8.79□□□□□ -1
SRP54-210ENST00000556380 A0A0G2JND7 137 aa8.79□□□□□ -1
SRP54-210ENST00000556380 A0A1B0GTH9 108 aa8.79□□□□□ -1
SRP54-210ENST00000556380 PRAMEF27A3QJZ7 478 aa8.79□□□□□ -1
SRP54-210ENST00000556380 ACOT7O00154 380 aa8.79□□□□□ -1
SRP54-210ENST00000556380 AQP7O14520 342 aa8.79□□□□□ -1
SRP54-210ENST00000556380 GNB5O14775 395 aa8.79□□□□□ -1
SRP54-210ENST00000556380 SUSD5O60279 629 aa8.79□□□□□ -1
SRP54-210ENST00000556380 HCN1O60741 890 aa8.79□□□□□ -1
SRP54-210ENST00000556380 GSNP06396 782 aa8.79□□□□□ -1
SRP54-210ENST00000556380 GUSBP08236 651 aa8.79□□□□□ -1
SRP54-210ENST00000556380 ZCCHC18P0CG32 403 aa8.79□□□□□ -1
SRP54-210ENST00000556380 RNF224P0DH78 156 aa8.79□□□□□ -1
SRP54-210ENST00000556380 HOXB9P17482 250 aaPredicted RBP8.79□□□□□ -1
SRP54-210ENST00000556380 ENDOUP21128 410 aaKnown RBP8.79□□□□□ -1
SRP54-210ENST00000556380 MATN1P21941 496 aa8.79□□□□□ -1
SRP54-210ENST00000556380 ELAVL4P26378 380 aaKnown RBP8.79□□□□□ -1
SRP54-210ENST00000556380 SOAT1P35610 550 aa8.79□□□□□ -1
SRP54-210ENST00000556380 CA7P43166 264 aa8.79□□□□□ -1
SRP54-210ENST00000556380 TRPC1P48995 793 aa8.79□□□□□ -1
SRP54-210ENST00000556380 MVDP53602 400 aa8.79□□□□□ -1
SRP54-210ENST00000556380 PSMD4P55036 377 aaKnown RBP8.79□□□□□ -1
SRP54-210ENST00000556380 UBAP2LQ14157 1087 aaKnown RBP8.79□□□□□ -1
SRP54-210ENST00000556380 RCAN2Q14206 197 aa8.79□□□□□ -1
SRP54-210ENST00000556380 ELOAQ14241 798 aaKnown RBP8.79□□□□□ -1
SRP54-210ENST00000556380 SQLEQ14534 574 aa8.79□□□□□ -1
SRP54-210ENST00000556380 C3AR1Q16581 482 aa8.79□□□□□ -1
SRP54-210ENST00000556380 C4orf17Q53FE4 359 aa8.79□□□□□ -1
SRP54-210ENST00000556380 EMC4Q5J8M3 183 aa8.79□□□□□ -1
SRP54-210ENST00000556380 CCNJQ5T5M9 372 aa8.79□□□□□ -1
SRP54-210ENST00000556380 HEPHL1Q6MZM0 1159 aa8.79□□□□□ -1
SRP54-210ENST00000556380 ARHGAP11AQ6P4F7 1023 aa8.79□□□□□ -1
SRP54-210ENST00000556380 GALNT10Q86SR1 603 aa8.79□□□□□ -1
SRP54-210ENST00000556380 MARCH3Q86UD3 253 aa8.79□□□□□ -1
SRP54-210ENST00000556380 DOLPP1Q86YN1 238 aa8.79□□□□□ -1
SRP54-210ENST00000556380 PLCZ1Q86YW0 608 aa8.79□□□□□ -1
SRP54-210ENST00000556380 FAM26EQ8N5C1 309 aa8.79□□□□□ -1
SRP54-210ENST00000556380 COX18Q8N8Q8 333 aa8.79□□□□□ -1
SRP54-210ENST00000556380 FADS6Q8N9I5 356 aa8.79□□□□□ -1
SRP54-210ENST00000556380 CHDHQ8NE62 594 aaPredicted RBP8.79□□□□□ -1
SRP54-210ENST00000556380 OR5D16Q8NGK9 328 aa8.79□□□□□ -1
SRP54-210ENST00000556380 OR1J4Q8NGS1 313 aa8.79□□□□□ -1
SRP54-210ENST00000556380 ADAMTS15Q8TE58 950 aa8.79□□□□□ -1
SRP54-210ENST00000556380 GTF2H4Q92759 462 aa8.79□□□□□ -1
SRP54-210ENST00000556380 JSRP1Q96MG2 331 aaPredicted RBP8.79□□□□□ -1
SRP54-210ENST00000556380 PANX1Q96RD7 426 aa8.79□□□□□ -1
SRP54-210ENST00000556380 SDF2Q99470 211 aa8.79□□□□□ -1
SRP54-210ENST00000556380 PAIP1Q9H074 479 aaKnown RBP8.79□□□□□ -1
SRP54-210ENST00000556380 UBQLN4Q9NRR5 601 aa8.79□□□□□ -1
SRP54-210ENST00000556380 KLRF1Q9NZS2 232 aa8.79□□□□□ -1
SRP54-210ENST00000556380 SPRR3Q9UBC9 169 aa8.79□□□□□ -1
SRP54-210ENST00000556380 FBXL2Q9UKC9 423 aa8.79□□□□□ -1
SRP54-210ENST00000556380 ICE1Q9Y2F5 2266 aa8.78□□□□□ -1
SRP54-210ENST00000556380 DUXAA6NLW8 204 aa8.78□□□□□ -1
SRP54-210ENST00000556380 ALG1L2C9J202 215 aa8.78□□□□□ -1
SRP54-210ENST00000556380 RFXANKO14593 260 aa8.78□□□□□ -1
SRP54-210ENST00000556380 LRRTM2O43300 516 aa8.78□□□□□ -1
SRP54-210ENST00000556380 ZIC3O60481 467 aa8.78□□□□□ -1
SRP54-210ENST00000556380 CDC40O60508 579 aaKnown RBP eCLIP8.78□□□□□ -1
SRP54-210ENST00000556380 CBR3O75828 277 aa8.78□□□□□ -1
SRP54-210ENST00000556380 OXSR1O95747 527 aaPredicted RBP8.78□□□□□ -1
SRP54-210ENST00000556380 LDLRP01130 860 aa8.78□□□□□ -1
SRP54-210ENST00000556380 VIMP08670 466 aaKnown RBP8.78□□□□□ -1
SRP54-210ENST00000556380 CAPN3P20807 821 aa8.78□□□□□ -1
SRP54-210ENST00000556380 PTGS2P35354 604 aa8.78□□□□□ -1
SRP54-210ENST00000556380 MASP1P48740 699 aa8.78□□□□□ -1
SRP54-210ENST00000556380 CASP9P55211 416 aa8.78□□□□□ -1
SRP54-210ENST00000556380 STX1BP61266 288 aa8.78□□□□□ -1
SRP54-210ENST00000556380 RBPJQ06330 500 aa8.78□□□□□ -1
SRP54-210ENST00000556380 ARHGAP11BQ3KRB8 267 aa8.78□□□□□ -1
SRP54-210ENST00000556380 GTDC1Q4AE62 458 aa8.78□□□□□ -1
SRP54-210ENST00000556380 TIGD2Q4W5G0 525 aa8.78□□□□□ -1
SRP54-210ENST00000556380 AGKQ53H12 422 aa8.78□□□□□ -1
SRP54-210ENST00000556380 KLHL26Q53HC5 615 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms