RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 WNT3P56703 355 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 NUP107P57740 925 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 ZNF630Q2M218 657 aaPredicted RBP10.49□□□□□ -0.73
SLIRP-205ENST00000556310 WIPI1Q5MNZ9 446 aaPredicted RBP10.49□□□□□ -0.73
SLIRP-205ENST00000556310 VASNQ6EMK4 673 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 RTL6Q6ICC9 239 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 CDC73Q6P1J9 531 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 BHLHB9Q6PI77 547 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 MAVSQ7Z434 540 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 YRDCQ86U90 279 aaKnown RBP10.49□□□□□ -0.73
SLIRP-205ENST00000556310 PM20D2Q8IYS1 436 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 ULK2Q8IYT8 1036 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 CLECL1Q8IZS7 167 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 FADS6Q8N9I5 356 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 OR4K17Q8NGC6 315 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 FAM110BQ8TC76 370 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 ASB5Q8WWX0 329 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 RND1Q92730 232 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 SDCCAG3Q96C92 435 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 C16orf58Q96GQ5 468 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 MAELQ96JY0 434 aaKnown RBP10.49□□□□□ -0.73
SLIRP-205ENST00000556310 C7orf26Q96N11 449 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 TTYH2Q9BSA4 534 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 YIPF4Q9BSR8 244 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 BTBD2Q9BX70 525 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 UGT2B28Q9BY64 529 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 ACTRT3Q9BYD9 372 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 TBL1XR1Q9BZK7 514 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 PRDM14Q9GZV8 571 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 PIGUQ9H490 435 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 WDR55Q9H6Y2 383 aaPredicted RBP10.49□□□□□ -0.73
SLIRP-205ENST00000556310 SDHAF3Q9NRP4 125 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 GPATCH2Q9NW75 528 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 DKKL1Q9UK85 242 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 FBXL2Q9UKC9 423 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 FAF1Q9UNN5 650 aaPredicted RBP10.49□□□□□ -0.73
SLIRP-205ENST00000556310 SLC6A5Q9Y345 797 aa10.49□□□□□ -0.73
SLIRP-205ENST00000556310 IGLV3-32A0A0A0MS00 114 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 GOLGA8QA0A0J9YX86 632 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 RNF103-CHMP3A0A140T963 221 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 GOLGA8OA6NCC3 632 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 CYSRT1A8MQ03 144 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 C17orf51A8MQB3 221 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 B4DXG7 233 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 FAM47E-STBD1D6RA91 191 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 GOLGA8NF8WBI6 632 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 SCN2BO60939 215 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 SOX30O94993 753 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 GLI4P10075 376 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 BMP7P18075 431 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 HTR1EP28566 365 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 CHRNB4P30926 498 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 POU6F2P78424 691 aaPredicted RBP10.48□□□□□ -0.73
SLIRP-205ENST00000556310 STX5Q13190 355 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 GANABQ14697 944 aaKnown RBP10.48□□□□□ -0.73
SLIRP-205ENST00000556310 CDSNQ15517 529 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 GRAMD1BQ3KR37 738 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 FAM174BQ3ZCQ3 159 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 ACSF3Q4G176 576 aaPredicted RBP10.48□□□□□ -0.73
SLIRP-205ENST00000556310 SPANXN4Q5MJ08 99 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 DCST1Q5T197 706 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 ANXA8L1Q5VT79 327 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 ZNF787Q6DD87 383 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 OR5M10Q6IEU7 315 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 FIGNL1Q6PIW4 674 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 IFNEQ86WN2 208 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 VPS37AQ8NEZ2 397 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 OR2M3Q8NG83 312 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 OR4A15Q8NGL6 344 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 OR5AK3PQ8NH89 298 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 OR14L1PQ8NHC6 308 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 LRRC8CQ8TDW0 803 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 ACTRT2Q8TDY3 377 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 CA5BP1Q8WTZ4 195 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 CDS1Q92903 461 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 ABTB1Q969K4 478 aaPredicted RBP10.48□□□□□ -0.73
SLIRP-205ENST00000556310 OTUB1Q96FW1 271 aaPredicted RBP10.48□□□□□ -0.73
SLIRP-205ENST00000556310 CHMP6Q96FZ7 201 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 TIMP4Q99727 224 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 G6PC3Q9BUM1 346 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 HHATLQ9HCP6 504 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 CHST11Q9NPF2 352 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 TAS2R10Q9NYW0 307 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 PCDHGB4Q9UN71 923 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 RNF6Q9Y252 685 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 MRPS18CQ9Y3D5 142 aaKnown RBP10.48□□□□□ -0.73
SLIRP-205ENST00000556310 GPR45Q9Y5Y3 372 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 NOTCH2Q04721 2471 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 PCNX3Q9H6A9 2034 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 DOCK7Q96N67 2140 aa10.48□□□□□ -0.73
SLIRP-205ENST00000556310 PKDREJQ9NTG1 2253 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 HCFC1P51610 2035 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 PRSS51A0A1B0GVH4 220 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 AHRRA9YTQ3 701 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 ALG1L2C9J202 215 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 ZNF195O14628 629 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 OXSR1O95747 527 aaPredicted RBP10.47□□□□□ -0.73
SLIRP-205ENST00000556310 ANGPTL1O95841 491 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 IDO1P14902 403 aa10.47□□□□□ -0.73
SLIRP-205ENST00000556310 TBXA2RP21731 343 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms