RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 ERVPABLB-1P60509 514 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 ID2Q02363 134 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 C1orf94Q6P1W5 598 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 MCATQ8IVS2 390 aaKnown RBP10.12□□□□□ -0.79
ACTN1-216ENST00000556083 KRTCAP2Q8N6L1 136 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 ASCC1Q8N9N2 400 aaKnown RBP10.12□□□□□ -0.79
ACTN1-216ENST00000556083 NKX2-4Q9H2Z4 354 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 TREX1Q9NSU2 369 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 HHLA1C9JL84 531 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 DIRAS1O95057 198 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 TMEM225BP0DP42 221 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 IVDP26440 423 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 ZNF81P51508 661 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 PPP1R3AQ16821 1122 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 GPRIN1Q7Z2K8 1008 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 NLRP8Q86W28 1048 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 BPHLQ86WA6 291 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-216ENST00000556083 PPP1R3BQ86XI6 285 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 SLC35F2Q8IXU6 374 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 MKXQ8IYA7 352 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 ZBTB8BQ8NAP8 495 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-216ENST00000556083 CNOT9Q92600 299 aaKnown RBP10.12□□□□□ -0.79
ACTN1-216ENST00000556083 FER1L6-AS2Q96M78 137 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 DMRTB1Q96MA1 342 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 INTS14Q96SY0 518 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 ZBTB20Q9HC78 741 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-216ENST00000556083 C17orf105B2RV13 164 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 H0YIV9 168 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 SULT1C2O00338 296 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 UBFD1O14562 309 aaKnown RBP10.11□□□□□ -0.79
ACTN1-216ENST00000556083 TNFRSF10CO14798 259 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 EIF1BO60739 113 aaKnown RBP10.11□□□□□ -0.79
ACTN1-216ENST00000556083 ECI1P42126 302 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 SH3BP2P78314 561 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 PRDX1Q06830 199 aaKnown RBP10.11□□□□□ -0.79
ACTN1-216ENST00000556083 APOFQ13790 326 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 PLAG1Q6DJT9 500 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 LPCAT3Q6P1A2 487 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 SCD5Q86SK9 330 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 NOXA1Q86UR1 476 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 KLBQ86Z14 1044 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 NRMQ8IXM6 262 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 MFSD9Q8NBP5 474 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 MAFIPQ8WZ33 124 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 SMG9Q9H0W8 520 aaKnown RBP10.11□□□□□ -0.79
ACTN1-216ENST00000556083 ZNF160Q9HCG1 818 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 TAS2R3Q9NYW6 316 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 ERVK-19Q9WJR5 959 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 hCG_1807616A0A1W2PRN6 198 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 SULT2B1O00204 365 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 IGHG1P01857 330 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 LAMP1P11279 417 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 CD34P28906 385 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 ARSDP51689 593 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 CAV3P56539 151 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 RAB38P57729 211 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 RAB5BP61020 215 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 WDR5P61964 334 aaKnown RBP10.11□□□□□ -0.79
ACTN1-216ENST00000556083 BTBD16Q32M84 506 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 CCSAPQ6IQ19 270 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-216ENST00000556083 OR4N5Q8IXE1 308 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 ACOT4Q8N9L9 421 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 POGLUT1Q8NBL1 392 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 OR6T1Q8NGN1 323 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 CCDC120Q96HB5 630 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 MICU1Q9BPX6 476 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 SLC25A31Q9H0C2 315 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 TSPAN10Q9H1Z9 355 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-216ENST00000556083 PLEKHA3Q9HB20 300 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 C12orf71A8MTZ7 269 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 EEF1E1O43324 174 aaKnown RBP10.11□□□□□ -0.79
ACTN1-216ENST00000556083 SFTPBP07988 381 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 UGT2B7P16662 529 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 FUT1P19526 365 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 HIST1H1TP22492 207 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-216ENST00000556083 RGS19P49795 217 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 DUSP7Q16829 419 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 Q6ZSR6 202 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 OR7G1Q8NGA0 311 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 NSUN5Q96P11 429 aaKnown RBP10.11□□□□□ -0.79
ACTN1-216ENST00000556083 HDAC8Q9BY41 377 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 ENKD1Q9H0I2 346 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 GSTO2Q9H4Y5 243 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 PRMT8Q9NR22 394 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-216ENST00000556083 KCND3Q9UK17 655 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 TP53TG5Q9Y2B4 290 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 HS3ST3A1Q9Y663 406 aa10.11□□□□□ -0.79
ACTN1-216ENST00000556083 A8MXE2 369 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 ETFAP13804 333 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 CPT2P23786 658 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 ACVR1BP36896 505 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 SIM1P81133 766 aaPredicted RBP10.1□□□□□ -0.79
ACTN1-216ENST00000556083 SF3A2Q15428 464 aaKnown RBP10.1□□□□□ -0.79
ACTN1-216ENST00000556083 AWAT2Q6E213 333 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 HAGHLQ6PII5 290 aaPredicted RBP10.1□□□□□ -0.79
ACTN1-216ENST00000556083 ADAMTSL4Q6UY14 1074 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 TMEM150AQ86TG1 271 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 MFSD6LQ8IWD5 586 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 CCDC28AQ8IWP9 274 aa10.1□□□□□ -0.79
ACTN1-216ENST00000556083 KIAA1958Q8N8K9 716 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms