RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 ZNF232Q9UNY5 417 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 ANGPT4Q9Y264 503 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 PCDHGA10Q9Y5H3 936 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 CHCHD2Q9Y6H1 151 aaPredicted RBP7.01□□□□□ -1.29
TDP1-214ENST00000556063 KCNE3Q9Y6H6 103 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 DNAJC13O75165 2243 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 ZFYVE26Q68DK2 2539 aa7□□□□□ -1.29
TDP1-214ENST00000556063 FRYQ5TBA9 3013 aa7□□□□□ -1.29
TDP1-214ENST00000556063 NBASA2RRP1 2371 aa7□□□□□ -1.29
TDP1-214ENST00000556063 PRORSD1PA6NEY8 169 aa7□□□□□ -1.29
TDP1-214ENST00000556063 ALG1L2C9J202 215 aa7□□□□□ -1.29
TDP1-214ENST00000556063 GTPBP1O00178 669 aaKnown RBP7□□□□□ -1.29
TDP1-214ENST00000556063 NDUFB5O43674 189 aa7□□□□□ -1.29
TDP1-214ENST00000556063 PEX1O43933 1283 aa7□□□□□ -1.29
TDP1-214ENST00000556063 GMNNO75496 209 aa7□□□□□ -1.29
TDP1-214ENST00000556063 SERPINB7O75635 380 aa7□□□□□ -1.29
TDP1-214ENST00000556063 UBOX5O94941 541 aa7□□□□□ -1.29
TDP1-214ENST00000556063 PGM3O95394 542 aa7□□□□□ -1.29
TDP1-214ENST00000556063 H6PDO95479 791 aa7□□□□□ -1.29
TDP1-214ENST00000556063 IFNA14P01570 189 aa7□□□□□ -1.29
TDP1-214ENST00000556063 IGKV1D-16P01601 117 aa7□□□□□ -1.29
TDP1-214ENST00000556063 DBIP07108 87 aaKnown RBP7□□□□□ -1.29
TDP1-214ENST00000556063 TFPTP0C1Z6 253 aa7□□□□□ -1.29
TDP1-214ENST00000556063 ARAFP10398 606 aa7□□□□□ -1.29
TDP1-214ENST00000556063 ETS2P15036 469 aa7□□□□□ -1.29
TDP1-214ENST00000556063 ELAVL4P26378 380 aaKnown RBP7□□□□□ -1.29
TDP1-214ENST00000556063 EVI2BP34910 448 aa7□□□□□ -1.29
TDP1-214ENST00000556063 PCGF2P35227 344 aa7□□□□□ -1.29
TDP1-214ENST00000556063 DCTP40126 519 aa7□□□□□ -1.29
TDP1-214ENST00000556063 CD97P48960 835 aa7□□□□□ -1.29
TDP1-214ENST00000556063 ST13P50502 369 aaKnown RBP7□□□□□ -1.29
TDP1-214ENST00000556063 SLC7A2P52569 658 aa7□□□□□ -1.29
TDP1-214ENST00000556063 EEFSECP57772 596 aaKnown RBP7□□□□□ -1.29
TDP1-214ENST00000556063 PLGLB1Q02325 96 aa7□□□□□ -1.29
TDP1-214ENST00000556063 CHRNEQ04844 493 aa7□□□□□ -1.29
TDP1-214ENST00000556063 C17orf67Q0P5P2 114 aa7□□□□□ -1.29
TDP1-214ENST00000556063 SCARB2Q14108 478 aa7□□□□□ -1.29
TDP1-214ENST00000556063 LARS2Q15031 903 aaKnown RBP7□□□□□ -1.29
TDP1-214ENST00000556063 ZNF141Q15928 474 aa7□□□□□ -1.29
TDP1-214ENST00000556063 SYPL1Q16563 259 aa7□□□□□ -1.29
TDP1-214ENST00000556063 GRAMD1BQ3KR37 738 aa7□□□□□ -1.29
TDP1-214ENST00000556063 PLEKHN1Q494U1 663 aaPredicted RBP7□□□□□ -1.29
TDP1-214ENST00000556063 SPATS1Q496A3 300 aa7□□□□□ -1.29
TDP1-214ENST00000556063 NADK2Q4G0N4 442 aa7□□□□□ -1.29
TDP1-214ENST00000556063 RABL3Q5HYI8 236 aa7□□□□□ -1.29
TDP1-214ENST00000556063 SAMD4BQ5PRF9 694 aaKnown RBP7□□□□□ -1.29
TDP1-214ENST00000556063 PRAMEF20Q5VT98 475 aa7□□□□□ -1.29
TDP1-214ENST00000556063 AP1ARQ63HQ0 302 aa7□□□□□ -1.29
TDP1-214ENST00000556063 FAM180AQ6UWF9 173 aa7□□□□□ -1.29
TDP1-214ENST00000556063 NET1Q7Z628 596 aaPredicted RBP7□□□□□ -1.29
TDP1-214ENST00000556063 PATL1Q86TB9 770 aaKnown RBP7□□□□□ -1.29
TDP1-214ENST00000556063 SLC22A16Q86VW1 577 aa7□□□□□ -1.29
TDP1-214ENST00000556063 ZNF227Q86WZ6 799 aa7□□□□□ -1.29
TDP1-214ENST00000556063 SULF2Q8IWU5 870 aa7□□□□□ -1.29
TDP1-214ENST00000556063 SLC15A3Q8IY34 581 aa7□□□□□ -1.29
TDP1-214ENST00000556063 ARHGAP24Q8N264 748 aa7□□□□□ -1.29
TDP1-214ENST00000556063 ZNF614Q8N883 585 aa7□□□□□ -1.29
TDP1-214ENST00000556063 ANKFN1Q8N957 763 aa7□□□□□ -1.29
TDP1-214ENST00000556063 OR2T12Q8NG77 320 aa7□□□□□ -1.29
TDP1-214ENST00000556063 OR4C3Q8NH37 302 aa7□□□□□ -1.29
TDP1-214ENST00000556063 REXO5Q96IC2 774 aaKnown RBP7□□□□□ -1.29
TDP1-214ENST00000556063 ZNF597Q96LX8 424 aa7□□□□□ -1.29
TDP1-214ENST00000556063 NODALQ96S42 347 aa7□□□□□ -1.29
TDP1-214ENST00000556063 ZNF607Q96SK3 696 aa7□□□□□ -1.29
TDP1-214ENST00000556063 TREX2Q9BQ50 279 aaPredicted RBP7□□□□□ -1.29
TDP1-214ENST00000556063 SAP130Q9H0E3 1048 aa7□□□□□ -1.29
TDP1-214ENST00000556063 IKZF5Q9H5V7 419 aa7□□□□□ -1.29
TDP1-214ENST00000556063 BCL2L10Q9HD36 194 aa7□□□□□ -1.29
TDP1-214ENST00000556063 SH2D2AQ9NP31 389 aa7□□□□□ -1.29
TDP1-214ENST00000556063 AGPAT4Q9NRZ5 378 aa7□□□□□ -1.29
TDP1-214ENST00000556063 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7□□□□□ -1.29
TDP1-214ENST00000556063 PPP4R1LQ9P1A2 415 aa7□□□□□ -1.29
TDP1-214ENST00000556063 SLC13A4Q9UKG4 626 aa7□□□□□ -1.29
TDP1-214ENST00000556063 CNOT11Q9UKZ1 510 aaKnown RBP7□□□□□ -1.29
TDP1-214ENST00000556063 MKLN1Q9UL63 735 aa7□□□□□ -1.29
TDP1-214ENST00000556063 IFT52Q9Y366 437 aa7□□□□□ -1.29
TDP1-214ENST00000556063 DTNAQ9Y4J8 743 aa7□□□□□ -1.29
TDP1-214ENST00000556063 SEC23IPQ9Y6Y8 1000 aaKnown RBP7□□□□□ -1.29
TDP1-214ENST00000556063 DMXL2Q8TDJ6 3036 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 A0A1W2PQD3 144 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 ELOVL7A1L3X0 281 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 SERINC4A6NH21 518 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 AGAP5A6NIR3 686 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 TTLL8A6PVC2 850 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 FAM220BPB1ANY3 271 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 FAM47E-STBD1D6RA91 191 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 GSTA4O15217 222 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 GYG2O15488 501 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 SCO2O43819 266 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 KIAA0513O60268 411 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 FADS1O60427 444 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 FCMRO60667 390 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 STAMBPO95630 424 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 OXSR1O95747 527 aaPredicted RBP6.99□□□□□ -1.29
TDP1-214ENST00000556063 CHRM4P08173 479 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 NUDT7P0C024 238 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 FREM3P0C091 2139 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 IL7RP16871 459 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 MSX1P28360 303 aa6.99□□□□□ -1.29
TDP1-214ENST00000556063 GCKP35557 465 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms