RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 LRRC25Q8N386 305 aaPredicted RBP6.36□□□□□ -1.39
SLIRP-204ENST00000555890 HORMAD2Q8N7B1 307 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 OR10Q1Q8NGQ4 319 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 CYGBQ8WWM9 190 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 TFAP2CQ92754 450 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 TANKQ92844 425 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 UCN3Q969E3 161 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 NRBF2Q96F24 287 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 FAM46AQ96IP4 442 aaKnown RBP6.36□□□□□ -1.39
SLIRP-204ENST00000555890 FCRL4Q96PJ5 515 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 ZNF607Q96SK3 696 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 CD180Q99467 661 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 ADI1Q9BV57 179 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 ANKRD60Q9BZ19 345 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 RAB33BQ9H082 229 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 OR51I1Q9H343 314 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 TRIM45Q9H8W5 580 aaPredicted RBP6.36□□□□□ -1.39
SLIRP-204ENST00000555890 REEP1Q9H902 201 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 SYNPO2LQ9H987 977 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 CLK4Q9HAZ1 481 aaKnown RBP6.36□□□□□ -1.39
SLIRP-204ENST00000555890 PNPLA3Q9NST1 481 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 USE1Q9NZ43 259 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 P2RX2Q9UBL9 471 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 DAPP1Q9UN19 280 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 PLCL2Q9UPR0 1127 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 PADI2Q9Y2J8 665 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 FAM32AQ9Y421 112 aaKnown RBP6.36□□□□□ -1.39
SLIRP-204ENST00000555890 PCDHGB3Q9Y5G1 929 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 SCN2AQ99250 2005 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 CCDC88CQ9P219 2028 aa6.36□□□□□ -1.39
SLIRP-204ENST00000555890 KIF26BQ2KJY2 2108 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 TLCD2A6NGC4 264 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 SERINC4A6NH21 518 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 DUXAA6NLW8 204 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 RNF212BA8MTL3 300 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 hCG_2039718K7EN88 272 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 ADAMDEC1O15204 470 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 HS6ST1O60243 411 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 GALR3O60755 368 aaPredicted RBP6.35□□□□□ -1.39
SLIRP-204ENST00000555890 SDC3O75056 442 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 PRKRAO75569 313 aaKnown RBP6.35□□□□□ -1.39
SLIRP-204ENST00000555890 GCM2O75603 506 aaPredicted RBP6.35□□□□□ -1.39
SLIRP-204ENST00000555890 PGM3O95394 542 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 GPR75O95800 540 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 SEMG1P04279 462 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 ALPLP05186 524 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 BCHEP06276 602 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 C8orf89P0DMQ9 161 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 OR12D1P0DN82 309 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 NR2F1P10589 423 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 GLB1P16278 677 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 PORP16435 677 aaPredicted RBP6.35□□□□□ -1.39
SLIRP-204ENST00000555890 CDH2P19022 906 aaPredicted RBP6.35□□□□□ -1.39
SLIRP-204ENST00000555890 FPR1P21462 350 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 MYF6P23409 242 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 XKP51811 444 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 MAPK10P53779 464 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 TPD52P55327 224 aaPredicted RBP6.35□□□□□ -1.39
SLIRP-204ENST00000555890 ITGA1P56199 1179 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 SCAND1P57086 179 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 PCBP3P57721 371 aaKnown RBP6.35□□□□□ -1.39
SLIRP-204ENST00000555890 RAB38P57729 211 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 KCNJ10P78508 379 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 GK3PQ14409 553 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 SLC36A3Q495N2 470 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 TCTE1Q5JU00 501 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 ATAD3BQ5T9A4 648 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 GARNL3Q5VVW2 1013 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 PRAMEF8Q5VWM4 474 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 PRAMEF7Q5VXH5 474 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 TBPL2Q6SJ96 375 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 FAM92BQ6ZTR7 304 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 GDF7Q7Z4P5 450 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 VTCN1Q7Z7D3 282 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 GALNT10Q86SR1 603 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 SLC44A2Q8IWA5 706 aaPredicted RBP6.35□□□□□ -1.39
SLIRP-204ENST00000555890 DNAJC22Q8N4W6 341 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 ARL10Q8N8L6 244 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 TTC29Q8NA56 475 aaPredicted RBP6.35□□□□□ -1.39
SLIRP-204ENST00000555890 NUP43Q8NFH3 380 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 BBS10Q8TAM1 723 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 MIPOL1Q8TD10 442 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 ADAMTS18Q8TE60 1221 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 SLC38A5Q8WUX1 472 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 XAGE5Q8WWM1 108 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 GEMIN6Q8WXD5 167 aaKnown RBP6.35□□□□□ -1.39
SLIRP-204ENST00000555890 NCSTNQ92542 709 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 PROX1Q92786 737 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 RAB8BQ92930 207 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 TAMM41Q96BW9 452 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 ELP4Q96EB1 424 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 CNRIP1Q96F85 164 aaPredicted RBP6.35□□□□□ -1.39
SLIRP-204ENST00000555890 TMEM19Q96HH6 336 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 MAGED4Q96JG8 741 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 C7orf34Q96L11 122 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 ZNF681Q96N22 645 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 EPYCQ99645 322 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 CHRNA10Q9GZZ6 450 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 GABARAPL1Q9H0R8 117 aa6.35□□□□□ -1.39
SLIRP-204ENST00000555890 ZNF696Q9H7X3 374 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms