RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 EXOSC6Q5RKV6 272 aaKnown RBP11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 LRIG3Q6UXM1 1119 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 ZNF551Q7Z340 670 aaPredicted RBP11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 P4HA3Q7Z4N8 544 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 R3HCC1LQ7Z5L2 792 aaKnown RBP11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 OR6Y1Q8NGX8 325 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 OR2T11Q8NH01 316 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 FAM110BQ8TC76 370 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 ACTRT2Q8TDY3 377 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 EPS8L3Q8TE67 593 aaKnown RBP11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 DUSP19Q8WTR2 217 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 GFM2Q969S9 779 aaKnown RBP11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 PPCDCQ96CD2 204 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 STARD4Q96DR4 205 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 GIMAP5Q96F15 307 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 APOPT1Q96IL0 206 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 MS4A4EQ96PG1 132 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 GATA5Q9BWX5 397 aaPredicted RBP11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 TUBB1Q9H4B7 451 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 GIN1Q9NXP7 522 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 ELOVL5Q9NYP7 299 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 FLRT3Q9NZU0 649 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 MED11Q9P086 117 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 ZNF337Q9Y3M9 751 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 C17orf51A8MQB3 221 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 CASKO14936 926 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 SOX30O94993 753 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 CGAP01215 116 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 IGKV1D-16P01601 117 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 NUDT17P0C025 328 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 TBXA2RP21731 343 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 GPC1P35052 558 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 RPL3P39023 403 aaKnown RBP11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 KIR2DL2P43627 348 aaPredicted RBP11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 MANFP55145 182 aaKnown RBP11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 RPS3AP61247 264 aaKnown RBP11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 KEAP1Q14145 624 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 UGT3A2Q3SY77 523 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 MFSD12Q6NUT3 480 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 APOOLQ6UXV4 268 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 MARCH3Q86UD3 253 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 MISPQ8IVT2 679 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 C4orf33Q8N1A6 199 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 NATD1Q8N6N6 113 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 BANPQ8N9N5 519 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 LRRN4CLQ8ND94 238 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 NUP43Q8NFH3 380 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 GPR151Q8TDV0 419 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 CAVIN3Q969G5 261 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 SLC39A3Q9BRY0 314 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 C12orf65Q9H3J6 166 aaKnown RBP11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 EML4Q9HC35 981 aaKnown RBP11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 DLL4Q9NR61 685 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 BEX4Q9NWD9 120 aaPredicted RBP11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 ZNF226Q9NYT6 803 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 PTGDR2Q9Y5Y4 395 aa11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 PRRC2AP48634 2157 aaKnown RBP11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 NIPBLQ6KC79 2804 aaeCLIP11.44□□□□□ -0.58
HNRNPC-221ENST00000555883 A0A1W2PQD3 144 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 TMEM114B3SHH9 223 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 CTIFO43310 598 aaKnown RBP11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 MAPK1P28482 360 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 CD79BP40259 229 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 SERPINB4P48594 390 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 SUCLG1P53597 346 aaKnown RBP11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 RPL38P63173 70 aaKnown RBP11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 ADAM8P78325 824 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 STX5Q13190 355 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 PON3Q15166 354 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 GRAMD1BQ3KR37 738 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 ZNF385BQ569K4 471 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 VWA1Q6PCB0 445 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 PLXDC2Q6UX71 529 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 FAM214BQ7L5A3 538 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 GGNQ86UU5 652 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 TRABD2AQ86V40 505 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 UBQLNLQ8IYU4 475 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 GTPBP8Q8N3Z3 284 aaPredicted RBP11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 OR4C3Q8NH37 302 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 PSMA8Q8TAA3 256 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 TWIST2Q8WVJ9 160 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 FIG4Q92562 907 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 PIK3R3Q92569 461 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 CIDECQ96AQ7 238 aaPredicted RBP11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 ZBTB8AQ96BR9 441 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 TRIM44Q96DX7 344 aaPredicted RBP11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 PGM2Q96G03 612 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 PPP3R2Q96LZ3 170 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 TSSK3Q96PN8 268 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 STACQ99469 402 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 PINK1Q9BXM7 581 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 EQTNQ9NQ60 294 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 UBQLN4Q9NRR5 601 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 DUSP22Q9NRW4 184 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 SH3BP4Q9P0V3 963 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 LGALS13Q9UHV8 139 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 ATP6V1HQ9UI12 483 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 EIF3LQ9Y262 564 aaKnown RBP11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 TRAF6Q9Y4K3 522 aa11.43□□□□□ -0.58
HNRNPC-221ENST00000555883 GXYLT2A0PJZ3 443 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms