RNA–Protein interactions for RNA: ENST00000555778.1

SDR39U1-214, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 608 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-214ENST00000555778 FBXO34Q9NWN3 711 aa12.42□□□□□ -0.42
SDR39U1-214ENST00000555778 TRAF6Q9Y4K3 522 aa12.42□□□□□ -0.42
SDR39U1-214ENST00000555778 SNX8Q9Y5X2 465 aa12.42□□□□□ -0.42
SDR39U1-214ENST00000555778 C2CD3Q4AC94 2353 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 MTORP42345 2549 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 NPIPA5A0A0B4J1W7 369 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 WDR91A4D1P6 747 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 SLC22A20A6NK97 555 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 NPIPA7E9PJI5 369 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 NPHS1O60500 1241 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 TNFSF13O75888 250 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 OPN1LWP04000 364 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 NPIPA8P0DM63 369 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 CLDN15P56746 228 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 PSPHP78330 225 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 LASP1Q14847 261 aaKnown RBP12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 XKR7Q5GH72 579 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 CNPY4Q8N129 248 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 KRTCAP2Q8N6L1 136 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 COX18Q8N8Q8 333 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 SLC16A11Q8NCK7 471 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 OR5AK3PQ8NH89 298 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 FNDC9Q8TBE3 224 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 FAM222BQ8WU58 562 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 WNT2BQ93097 391 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 OPN3Q9H1Y3 402 aaPredicted RBP12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 TMEM185BQ9H7F4 350 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 ZNF395Q9H8N7 513 aaPredicted RBP12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 SLC24A3Q9HC58 644 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 SIRT3Q9NTG7 399 aaPredicted RBP12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 ZCCHC3Q9NUD5 404 aaKnown RBP12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 GIN1Q9NXP7 522 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 JKAMPQ9P055 326 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 ZNF337Q9Y3M9 751 aa12.41□□□□□ -0.42
SDR39U1-214ENST00000555778 HCRTR2O43614 444 aa12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 DIAPH2O60879 1101 aa12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 RCBTB2O95199 551 aa12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 OXSR1O95747 527 aaPredicted RBP12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 LAMP1P11279 417 aa12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 CHMP24386 653 aa12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 SOAT1P35610 550 aa12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 TP53BP2Q13625 1128 aa12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 PON3Q15166 354 aa12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 PDCD2Q16342 344 aaPredicted RBP12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 KRT71Q3SY84 523 aa12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 ATP6AP1LQ52LC2 224 aa12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 CHMP1BQ7LBR1 199 aa12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 LSRQ86X29 649 aaPredicted RBP12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 MEIOBQ8N635 442 aa12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 FNDC5Q8NAU1 212 aa12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 OR4C3Q8NH37 302 aa12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.4□□□□□ -0.422e-7■■■■■ 32.7
SDR39U1-214ENST00000555778 CDS1Q92903 461 aa12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 FAM120BQ96EK7 910 aaKnown RBP12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 ZDHHC2Q9UIJ5 367 aa12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 ST6GALNAC2Q9UJ37 374 aa12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 MRTO4Q9UKD2 239 aaKnown RBP12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 PACSIN3Q9UKS6 424 aa12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 VPS13CQ709C8 3753 aa12.4□□□□□ -0.42
SDR39U1-214ENST00000555778 ABCA4P78363 2273 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 EMC8O43402 210 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 KCNK2O95069 426 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 NKX2-2O95096 273 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 C6orf47O95873 294 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 IL18BPO95998 194 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 BPGMP07738 259 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 ALOX5P09917 674 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 PEPDP12955 493 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 CCKARP32238 428 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 FRKP42685 505 aaPredicted RBP12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 ASMTP46597 345 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 CLK3P49761 638 aaKnown RBP12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 PSMD4P55036 377 aaKnown RBP12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 RPS26P62854 115 aaKnown RBP12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 SORDQ00796 357 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 ZNF844Q08AG5 666 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 GANABQ14697 944 aaKnown RBP12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 CD226Q15762 336 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 NDUFAF6Q330K2 333 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 SPDYE7PQ495Y7 208 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 VPS26BQ4G0F5 336 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 SPNS3Q6ZMD2 512 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 RNF165Q6ZSG1 346 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 KIF18BQ86Y91 864 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 CDRT4Q8N9R6 151 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 GOT1L1Q8NHS2 421 aaPredicted RBP12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 PPP1R14CQ8TAE6 165 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 TUBGCP3Q96CW5 907 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 ARSGQ96EG1 525 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 DTNBP1Q96EV8 351 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 ZNF764Q96H86 408 aaPredicted RBP12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 METTL2AQ96IZ6 378 aaKnown RBP12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 PPP3R2Q96LZ3 170 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 CXorf36Q9H7Y0 433 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 PTGES2Q9H7Z7 377 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 C3orf14Q9HBI5 128 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 EML4Q9HC35 981 aaKnown RBP12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 SDHAF3Q9NRP4 125 aa12.39□□□□□ -0.43
SDR39U1-214ENST00000555778 FOXD3Q9UJU5 478 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms