RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 HNF4AP41235 474 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 TDGF1P3P51864 188 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 MTTPP55157 894 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 SLC37A1P57057 533 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 RAB38P57729 211 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 RAB8AP61006 207 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 TUBA4AP68366 448 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 IRF8Q02556 426 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 GAB1Q13480 694 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 CUL3Q13618 768 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 RUNX2Q13950 521 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 RCN2Q14257 317 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 KPNB1Q14974 876 aaKnown RBP3.83□□□□□ -1.8
CPSF2-204ENST00000555244 SLMAPQ14BN4 828 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 ABRAXAS2Q15018 415 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 EFTUD2Q15029 972 aaKnown RBP eCLIP3.83□□□□□ -1.8
CPSF2-204ENST00000555244 NSDHLQ15738 373 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 MEP1AQ16819 746 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 C18orf21Q32NC0 220 aaPredicted RBP3.83□□□□□ -1.8
CPSF2-204ENST00000555244 GGTA1PQ4G0N0 100 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 DEFB134Q4QY38 66 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 TECRLQ5HYJ1 363 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 ACER2Q5QJU3 275 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 FHL5Q5TD97 284 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 PAPD4Q6PIY7 484 aaKnown RBP3.83□□□□□ -1.8
CPSF2-204ENST00000555244 LANCL3Q6ZV70 420 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 FRA10AC1Q70Z53 315 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 TRMT10CQ7L0Y3 403 aaKnown RBP3.83□□□□□ -1.8
CPSF2-204ENST00000555244 CMC1Q7Z7K0 106 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 TMPRSS11BQ86T26 416 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 TBC1D1Q86TI0 1168 aaPredicted RBP3.83□□□□□ -1.8
CPSF2-204ENST00000555244 CTAGE4Q8IX94 777 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 CTAGE3PQ8IX95 158 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.83□□□□□ -1.8
CPSF2-204ENST00000555244 PRSS58Q8IYP2 241 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 CA13Q8N1Q1 262 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 ZCCHC7Q8N3Z6 543 aaKnown RBP3.83□□□□□ -1.8
CPSF2-204ENST00000555244 SPATA6LQ8N4H0 392 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 BCORP1Q8N888 145 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 CEP112Q8N8E3 955 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 APCDD1LQ8NCL9 501 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 OR7G3Q8NG95 312 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 OR5T3Q8NGG3 340 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 OR8K3Q8NH51 312 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 KIF18AQ8NI77 898 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 WDR20Q8TBZ3 569 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 DCAKDQ8WVC6 231 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.83□□□□□ -1.8
CPSF2-204ENST00000555244 NR4A3Q92570 626 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 NXNL1Q96CM4 212 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 C19orf60Q96EN9 201 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 SCMH1Q96GD3 660 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 MAELQ96JY0 434 aaKnown RBP3.83□□□□□ -1.8
CPSF2-204ENST00000555244 RITA1Q96K30 269 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 C16orf45Q96MC5 204 aaPredicted RBP3.83□□□□□ -1.8
CPSF2-204ENST00000555244 TSNARE1Q96NA8 513 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 TAAR6Q96RI8 345 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 SERINC2Q96SA4 455 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 FMO2Q99518 471 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 LPAR4Q99677 370 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 EGFL8Q99944 293 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 TBCDQ9BTW9 1192 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 ABHD14AQ9BUJ0 271 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 NTMT1Q9BV86 223 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 MS4A8Q9BY19 250 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 ZNF717Q9BY31 904 aaPredicted RBP3.83□□□□□ -1.8
CPSF2-204ENST00000555244 ROGDIQ9GZN7 287 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 ILKAPQ9H0C8 392 aaPredicted RBP3.83□□□□□ -1.8
CPSF2-204ENST00000555244 CDC42EP4Q9H3Q1 356 aaKnown RBP3.83□□□□□ -1.8
CPSF2-204ENST00000555244 ALG9Q9H6U8 611 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 DDX31Q9H8H2 851 aaKnown RBP3.83□□□□□ -1.8
CPSF2-204ENST00000555244 PLEKHA2Q9HB19 425 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 AGPAT4Q9NRZ5 378 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 ABCF3Q9NUQ8 709 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 STMN3Q9NZ72 180 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 HCN3Q9P1Z3 774 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 ABI3Q9P2A4 366 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 TEKT2Q9UIF3 430 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 SCN3AQ9NY46 2000 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 ZGRF1Q86YA3 2104 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 DCHS2Q6V1P9 2916 aa3.83□□□□□ -1.8
CPSF2-204ENST00000555244 DIDO1Q9BTC0 2240 aaKnown RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 A0A087WUV0 522 aaPredicted RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 ANKUB1A6NFN9 424 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 UBXN8O00124 270 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 CLDN4O14493 209 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 SEMA3DO95025 777 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 LDLRP01130 860 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 CRYABP02511 175 aaKnown RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 STATHP02808 62 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 CELA2AP08217 269 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 RPS17P08708 135 aaKnown RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 SNRPAP09012 282 aaKnown RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 PEPDP12955 493 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 BMP5P22003 454 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 HIST1H1TP22492 207 aaPredicted RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 GNLYP22749 145 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 ATP5A1P25705 553 aaKnown RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 TNFRSF8P28908 595 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 TYK2P29597 1187 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms