RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 PSG6Q00889 435 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 FADDQ13158 208 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 VEZF1Q14119 521 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 RCN1Q15293 331 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 NTRK2Q16620 822 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 ZNF791Q3KP31 576 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-218ENST00000555213 TBCELQ5QJ74 424 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 ATAD3BQ5T9A4 648 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 SLC25A25Q6KCM7 469 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 CDC73Q6P1J9 531 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 NPSR1Q6W5P4 371 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 CCDC80Q76M96 950 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 SPATA24Q86W54 205 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 PRR22Q8IZ63 422 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 FAM86B1Q8N7N1 296 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 PSD4Q8NDX1 1056 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 CATSPER1Q8NEC5 780 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 OR5M3Q8NGP4 307 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 HOXB13Q92826 284 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-218ENST00000555213 TMBIM1Q969X1 311 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 TMCO6Q96DC7 493 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 RMND5BQ96G75 393 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-218ENST00000555213 SLC35A4Q96G79 324 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 COL21A1Q96P44 957 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 SIGLEC12Q96PQ1 595 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 SECISBP2Q96T21 854 aaKnown RBP10.03□□□□□ -0.8
SHMT2-218ENST00000555213 G6PC3Q9BUM1 346 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 SPATA9Q9BWV2 254 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 RAD21L1Q9H4I0 556 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 DCAF13Q9NV06 445 aaKnown RBP10.03□□□□□ -0.8
SHMT2-218ENST00000555213 EXD2Q9NVH0 621 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 GIN1Q9NXP7 522 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 CNIH4Q9P003 139 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 LUZP4Q9P127 313 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 PCDHGA10Q9Y5H3 936 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 CSAG2Q9Y5P2 127 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 MGAQ8IWI9 3026 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 IGSF10Q6WRI0 2623 aa10.03□□□□□ -0.8
SHMT2-218ENST00000555213 OR6C70A6NIJ9 312 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 TTLL8A6PVC2 850 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 ASNA1O43681 348 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 NKX2-2O95096 273 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 RASAL1O95294 804 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 AK1P00568 194 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 ARAFP10398 606 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 ACP2P11117 423 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 ATP6V1C1P21283 382 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 MATN1P21941 496 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 PCGF2P35227 344 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 PIGAP37287 484 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 RFX3P48380 749 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 ST13P50502 369 aaKnown RBP10.02□□□□□ -0.81
SHMT2-218ENST00000555213 PNLIPRP2P54317 469 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 PCBP3P57721 371 aaKnown RBP10.02□□□□□ -0.81
SHMT2-218ENST00000555213 FBXW4P57775 412 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 POU6F2P78424 691 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-218ENST00000555213 HPCAP84074 193 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 DUSP5Q16690 384 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 PLEKHN1Q494U1 663 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-218ENST00000555213 IQCCQ4KMZ1 466 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 SOWAHCQ53LP3 525 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-218ENST00000555213 SLC22A10Q63ZE4 541 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 HMBOX1Q6NT76 420 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 RPUSD3Q6P087 351 aaKnown RBP10.02□□□□□ -0.81
SHMT2-218ENST00000555213 ERICH5Q6P6B1 374 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 FAM180AQ6UWF9 173 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 LYPD8Q6UX82 237 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 NUP54Q7Z3B4 507 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 C16orf62Q7Z3J2 963 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 WDR53Q7Z5U6 358 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-218ENST00000555213 TSEN54Q7Z6J9 526 aaKnown RBP10.02□□□□□ -0.81
SHMT2-218ENST00000555213 PACS2Q86VP3 889 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 SLC16A11Q8NCK7 471 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 OR10G3Q8NGC4 313 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 PAQR8Q8TEZ7 354 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 SLC38A5Q8WUX1 472 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 FIG4Q92562 907 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 DIO2Q92813 273 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 RAB8BQ92930 207 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 SCMH1Q96GD3 660 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 BBC3Q96PG8 261 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-218ENST00000555213 ADOQ96SZ5 270 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 YIPF4Q9BSR8 244 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 BTBD2Q9BX70 525 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 RASSF4Q9H2L5 321 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 OR51I1Q9H343 314 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 PIGUQ9H490 435 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 METTL7AQ9H8H3 244 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 A4GALTQ9NPC4 353 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 OLAHQ9NV23 265 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 ARMC1Q9NVT9 282 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 MAGEL2Q9UJ55 1249 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 CORO2BQ9UQ03 480 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 LAMA5O15230 3695 aa10.02□□□□□ -0.81
SHMT2-218ENST00000555213 GCN1Q92616 2671 aaKnown RBP10.01□□□□□ -0.81
SHMT2-218ENST00000555213 TMEM247A6NEH6 219 aa10.01□□□□□ -0.81
SHMT2-218ENST00000555213 ACOT7O00154 380 aa10.01□□□□□ -0.81
SHMT2-218ENST00000555213 ZNF354AO60765 605 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-218ENST00000555213 ZIC2O95409 532 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-218ENST00000555213 IL33O95760 270 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms