RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CTRB1P17538 263 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 CSNK1A1P48729 337 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 TGFBR3Q03167 851 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 KCNC3Q14003 757 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 PPP1R3AQ16821 1122 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 CTRB2Q6GPI1 263 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 OR5M10Q6IEU7 315 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 RPL13AP3Q6NVV1 102 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 CDKN2AIPNLQ96HQ2 116 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 HSD17B14Q9BPX1 270 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 SLC38A1Q9H2H9 487 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 PRDM9Q9NQV7 894 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 PIGVQ9NUD9 493 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 ZDHHC2Q9UIJ5 367 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 ANKRD66B4E2M5 251 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 TRAF3IP2O43734 574 aaPredicted RBP6.53□□□□□ -1.36
SYNE2-216ENST00000555002 KLRC4O43908 158 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 VEGFCP49767 419 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 HSD17B7P56937 341 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 GPR50Q13585 617 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 RABL3Q5HYI8 236 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 SKA3Q8IX90 412 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 TERB2Q8NHR7 220 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 BADQ92934 168 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 IGSF9Q9P2J2 1179 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 GABARAPH6UMI1 98 aa6.52□□□□□ -1.36
SYNE2-216ENST00000555002 GABARAPO95166 117 aa6.52□□□□□ -1.36
SYNE2-216ENST00000555002 CST3P01034 146 aaPredicted RBP6.52□□□□□ -1.36
SYNE2-216ENST00000555002 CREB1P16220 341 aa6.52□□□□□ -1.36
SYNE2-216ENST00000555002 FAM26DQ5JW98 314 aa6.52□□□□□ -1.36
SYNE2-216ENST00000555002 PGAP3Q96FM1 320 aaPredicted RBP6.52□□□□□ -1.36
SYNE2-216ENST00000555002 OSBPL7Q9BZF2 842 aa6.52□□□□□ -1.36
SYNE2-216ENST00000555002 PPRC1Q5VV67 1664 aaKnown RBP6.52□□□□□ -1.36
SYNE2-216ENST00000555002 ABCA4P78363 2273 aa6.52□□□□□ -1.36
SYNE2-216ENST00000555002 DEPDC5O75140 1603 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.52□□□□□ -1.37
SYNE2-216ENST00000555002 ADAMTS4O75173 837 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 PAK4O96013 591 aaPredicted RBP6.52□□□□□ -1.37
SYNE2-216ENST00000555002 SOWAHAQ2M3V2 549 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 ZNF440Q8IYI8 595 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 APMAPQ9HDC9 416 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 GALPQ9UBC7 116 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 ERCC6L2Q5T890 1561 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 NRXN1Q9ULB1 1477 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 A0A0D9SEW6 157 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 A0A0G2JLL6 359 aaPredicted RBP6.52□□□□□ -1.37
SYNE2-216ENST00000555002 OR2T1O43869 369 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 DLX3O60479 287 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 SNCGO76070 127 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 ITGB2P05107 769 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 CT45A6P0DMU7 189 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 CT45A5P0DMU8 189 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 CT45A7P0DMV0 189 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 CT45A8P0DMV1 189 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 CT45A9P0DMV2 189 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 CD46P15529 392 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 EVI2BP34910 448 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 MAP2K3P46734 347 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 SLC11A1P49279 550 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 CT45A2Q5DJT8 189 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 CT45A1Q5HYN5 189 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 FAM57BQ71RH2 274 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 PRRT2Q7Z6L0 340 aaPredicted RBP6.52□□□□□ -1.37
SYNE2-216ENST00000555002 CT45A3Q8NHU0 189 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 C10orf82Q8WW14 230 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 CNOT9Q92600 299 aaKnown RBP6.52□□□□□ -1.37
SYNE2-216ENST00000555002 TEPSINQ96N21 525 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 HES7Q9BYE0 225 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 FGFBP2Q9BYJ0 223 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 CHRDQ9H2X0 955 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 ROBO3Q96MS0 1386 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 KIF1AQ12756 1690 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 LOC102725191A0A1B0GVB3 256 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 C20orf202A1L168 122 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 CDK1P06493 297 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 PORP16435 677 aaPredicted RBP6.52□□□□□ -1.37
SYNE2-216ENST00000555002 TIA1P31483 386 aaKnown RBP eCLIP6.52□□□□□ -1.37
SYNE2-216ENST00000555002 PAPD5Q8NDF8 572 aaKnown RBP6.52□□□□□ -1.37
SYNE2-216ENST00000555002 ITFG2Q969R8 447 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 CD244Q9BZW8 370 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 RPF2Q9H7B2 306 aaKnown RBP6.52□□□□□ -1.37
SYNE2-216ENST00000555002 FER1L5A0AVI2 2057 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 SLC22A2O15244 555 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 TCAPO15273 167 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 ARPC5O15511 151 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 ACSM3Q53FZ2 586 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 LIPIQ6XZB0 460 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 OR52N2Q8NGI0 321 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 PIGCQ92535 297 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 NKD2Q969F2 451 aaPredicted RBP6.52□□□□□ -1.37
SYNE2-216ENST00000555002 ZNF566Q969W8 418 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 FKBP10Q96AY3 582 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 ZNF775Q96BV0 537 aaPredicted RBP6.52□□□□□ -1.37
SYNE2-216ENST00000555002 RBMXL1Q96E39 390 aaKnown RBP6.52□□□□□ -1.37
SYNE2-216ENST00000555002 PHOX2BQ99453 314 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 SPIN2AQ99865 258 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 SPIN2BQ9BPZ2 258 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 RNF39Q9H2S5 420 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 ATG4BQ9Y4P1 393 aa6.52□□□□□ -1.37
SYNE2-216ENST00000555002 DIP2CQ9Y2E4 1556 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms