RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 C6orf120Q7Z4R8 191 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 GPAT4Q86UL3 456 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 SYT12Q8IV01 421 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 CLDN19Q8N6F1 224 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 POMGNT2Q8NAT1 580 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 GALNT11Q8NCW6 608 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 ST13P5Q8NFI4 369 aaPredicted RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 NLGN4YQ8NFZ3 816 aaPredicted RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 OR2L3Q8NG85 312 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 C1orf216Q8TAB5 229 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 FBXO30Q8TB52 745 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 RHBDD1Q8TEB9 315 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 RGP1Q92546 391 aaPredicted RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 OSTF1Q92882 214 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 YIPF5Q969M3 257 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 UPRTQ96BW1 309 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 HS6ST2Q96MM7 605 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 ZSWIM3Q96MP5 696 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 VSTM2LQ96N03 204 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 OR7D2Q96RA2 312 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 PANX1Q96RD7 426 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 SPATA5L1Q9BVQ7 753 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 NRIP3Q9NQ35 241 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 SLC35C2Q9NQQ7 365 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 CUTCQ9NTM9 273 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 TOR4AQ9NXH8 423 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 ARL15Q9NXU5 204 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 DNAJB12Q9NXW2 375 aaKnown RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 NCDNQ9UBB6 729 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 ETV7Q9Y603 341 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 SIRT4Q9Y6E7 314 aaPredicted RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 A0A0A6YYH2 397 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 PLSCR5A0PG75 271 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 A6NJ64 397 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 HIDE1A8MVS5 230 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 SNRPGP15A8MWD9 76 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 A8MXK9 166 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 E5RI56 91 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 H7BY64 318 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 TNFRSF10AO00220 468 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 CBX4O00257 560 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 CHP2O43745 196 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 CTNSO60931 367 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 FKTNO75072 461 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 GADD45GO95257 159 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 NADKO95544 446 aaPredicted RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 SLC4A1P02730 911 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 GSTT2P0CG29 244 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 GSTT2BP0CG30 244 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 COX7A2P14406 83 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 CENPAP49450 140 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 CCR9P51686 369 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 SMSP52788 366 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 NTHL1P78549 312 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 MRPS10P82664 201 aaKnown RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 SLBPQ14493 270 aaKnown RBP eCLIP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 TRIM60Q495X7 471 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 CLLU1Q5K131 121 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 PHF19Q5T6S3 580 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 TXNDC8Q6A555 127 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 GCNT7Q6ZNI0 430 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 PAGE2Q7Z2X7 111 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 HDDC2Q7Z4H3 204 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 FGD2Q7Z6J4 655 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 NAXDQ8IW45 347 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 OR9Q2Q8NGE9 314 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 HASPINQ8TF76 798 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 PTP4A1Q93096 173 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 SLC35A4Q96G79 324 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 TGIF2Q9GZN2 237 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 TSPAN10Q9H1Z9 355 aaPredicted RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 C11orf1Q9H5F2 150 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 ELOVL6Q9H5J4 265 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 CLN6Q9NWW5 311 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 NUDT5Q9UKK9 219 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 AURKCQ9UQB9 309 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 TMEM5Q9Y2B1 443 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 HIF3AQ9Y2N7 669 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 GPR55Q9Y2T6 319 aaPredicted RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 KCNE2Q9Y6J6 123 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 DOCK9Q9BZ29 2069 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 RNF103-CHMP3A0A140T963 221 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 A0A1W2PNV4 684 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 ANKRD20A5PA0PJZ0 165 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 ANKRD34BA5PLL1 514 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 OTOL1A6NHN0 477 aaPredicted RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 J3QRK9 145 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 K7ESM1 405 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 SULT1C2O00338 296 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF197O14709 1029 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 TERTO14746 1132 aaKnown RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 SSX4O60224 188 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 RGS9O75916 674 aaPredicted RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 IGKV3-11P04433 115 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 RPN2P04844 631 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 IFNW1P05000 195 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 CTSHP09668 335 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 PIRTP0C851 137 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 ADH5P11766 374 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 PRKCAP17252 672 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms