RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 SPATA7Q9P0W8 599 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 SPATA2Q9UM82 520 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 FOXJ3Q9UPW0 622 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 STK38LQ9Y2H1 464 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 NOSIPQ9Y314 301 aaKnown RBP3.96□□□□□ -1.78
SCFD1-211ENST00000554437 FBXO7Q9Y3I1 522 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 N6AMT1Q9Y5N5 214 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 COMMD3-BMI1R4GMX3 469 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 TP53BP1Q12888 1972 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-211ENST00000554437 KANK1Q14678 1352 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 ARHGEF35A5YM69 484 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 PCP4L1A6NKN8 68 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 SPECC1L-ADORA2AF8WAN1 911 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 NDUFS8O00217 210 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 ZNF264O43296 627 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 NMT2O60551 498 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 DNAJB6O75190 326 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 SEMA4FO95754 770 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 OTCP00480 354 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 MELTFP08582 738 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 SLC2A3P11169 496 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 ZNF44P15621 663 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 GLRA1P23415 457 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 HSD17B2P37059 387 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 EPS15P42566 896 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 SYKP43405 635 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 SLC6A8P48029 635 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 ACADVLP49748 655 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 NAPAP54920 295 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 NLRP11P59045 1033 aaKnown RBP3.95□□□□□ -1.78
SCFD1-211ENST00000554437 RPL27P61353 136 aaKnown RBP3.95□□□□□ -1.78
SCFD1-211ENST00000554437 HERV-K104P63124 156 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 TGM3Q08188 693 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 NCBP1Q09161 790 aaKnown RBP3.95□□□□□ -1.78
SCFD1-211ENST00000554437 MSLNQ13421 630 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-211ENST00000554437 IL18Q14116 193 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 BTG3Q14201 252 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-211ENST00000554437 SELPLGQ14242 412 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 SLC17A1Q14916 467 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 TRIP10Q15642 601 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 ZNF311Q5JNZ3 666 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 ZNF506Q5JVG8 444 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 TTC23Q5W5X9 447 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 CARD17Q5XLA6 110 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 ASPHD2Q6ICH7 369 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 NIPAL3Q6P499 406 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 CBLN3Q6UW01 205 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 YRDCQ86U90 279 aaKnown RBP3.95□□□□□ -1.78
SCFD1-211ENST00000554437 SERINC5Q86VE9 423 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 FGFRL1Q8N441 504 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 SUMF1Q8NBK3 374 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 ZNRF1Q8ND25 227 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 OR9K2Q8NGE7 335 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 PHYHIPQ92561 330 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 ANP32BQ92688 251 aaKnown RBP3.95□□□□□ -1.78
SCFD1-211ENST00000554437 OSTF1Q92882 214 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 MCHR2Q969V1 340 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 C1orf147Q96MC9 270 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-211ENST00000554437 VPS35Q96QK1 796 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 S1PR3Q99500 378 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 AGPAT1Q99943 283 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 GAL3ST1Q99999 423 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 NUP58Q9BVL2 599 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 NUSAP1Q9BXS6 441 aaKnown RBP3.95□□□□□ -1.78
SCFD1-211ENST00000554437 SLC7A5P2Q9GIP4 190 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 WWP1Q9H0M0 922 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 NT5DC2Q9H857 520 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 CALHM2Q9HA72 323 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 MEAF6Q9HAF1 191 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 BCAP29Q9UHQ4 241 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 OR10H1Q9Y4A9 318 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 ATG4BQ9Y4P1 393 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 SLCO1B1Q9Y6L6 691 aa3.95□□□□□ -1.78
SCFD1-211ENST00000554437 LOC100653049A0A140TA62 436 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 ZNF840PA6NDX5 716 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 E9PAM4 449 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 CHEK1O14757 476 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 NVLO15381 856 aaKnown RBP3.94□□□□□ -1.78
SCFD1-211ENST00000554437 DUSP11O75319 330 aaKnown RBP3.94□□□□□ -1.78
SCFD1-211ENST00000554437 FRAT2O75474 233 aaPredicted RBP3.94□□□□□ -1.78
SCFD1-211ENST00000554437 KRT34O76011 436 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 ANXA9O76027 345 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 UFL1O94874 794 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 HCKP08631 526 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 OR9G9P0C7N8 305 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 HNF1AP20823 631 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 AXLP30530 894 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 GRIA1P42261 906 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 FNTAP49354 379 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 DNAJC3Q13217 504 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 NME3Q13232 169 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 CYLC2Q14093 348 aaPredicted RBP3.94□□□□□ -1.78
SCFD1-211ENST00000554437 MEF2DQ14814 521 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 HEPACAMQ14CZ8 416 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 OR1C1Q15619 314 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 GPAT3Q53EU6 434 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 MPPE1Q53F39 396 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 ATF7IP2Q5U623 682 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 HIST2H2AA3Q6FI13 130 aa3.94□□□□□ -1.78
SCFD1-211ENST00000554437 SYT10Q6XYQ8 523 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms