RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 MFSD12Q6NUT3 480 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 ZCCHC12Q6PEW1 402 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 RINLQ6ZS11 566 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 WDR53Q7Z5U6 358 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-211ENST00000554310 CAMKMTQ7Z624 323 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 RIMKLAQ8IXN7 391 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 PM20D2Q8IYS1 436 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 ULK2Q8IYT8 1036 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 ARHGAP24Q8N264 748 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 KRTCAP2Q8N6L1 136 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 FAM83FQ8NEG4 500 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-211ENST00000554310 PSMA8Q8TAA3 256 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 OR5P2Q8WZ92 322 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 COQ8BQ96D53 544 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 GIMAP5Q96F15 307 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 TTYH2Q9BSA4 534 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 CADM1Q9BY67 442 aaKnown RBP11.9□□□□□ -0.5
SHMT2-211ENST00000554310 BHLHE41Q9C0J9 482 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-211ENST00000554310 PRDM14Q9GZV8 571 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 RUBCNLQ9H714 662 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 TCF7L2Q9NQB0 619 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 SIRT3Q9NTG7 399 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-211ENST00000554310 ZCCHC3Q9NUD5 404 aaKnown RBP11.9□□□□□ -0.5
SHMT2-211ENST00000554310 TAS2R1Q9NYW7 299 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 RNF6Q9Y252 685 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 ANKHD1Q8IWZ3 2542 aaKnown RBP11.9□□□□□ -0.5
SHMT2-211ENST00000554310 C2orf72A6NCS6 295 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 TRPC5OSA6NMA1 111 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 SLC22A2O15244 555 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 ACTL6AO96019 429 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 GLI4P10075 376 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 ADSLP30566 484 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-211ENST00000554310 SRD5A2P31213 254 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 GABRA3P34903 492 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 PRIM2P49643 509 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 MNAT1P51948 309 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 PRKAG1P54619 331 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 PMPCAQ10713 525 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 SF3B4Q15427 424 aaKnown RBP eCLIP11.89□□□□□ -0.518e-12■■■■■ 35.4
SHMT2-211ENST00000554310 CDSNQ15517 529 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 LSM12Q3MHD2 195 aaKnown RBP11.89□□□□□ -0.51
SHMT2-211ENST00000554310 ACSF3Q4G176 576 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-211ENST00000554310 DNAL1Q4LDG9 190 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 SLC9B1Q4ZJI4 515 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 EIPR1Q53HC9 387 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 WIPI1Q5MNZ9 446 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-211ENST00000554310 SP5Q6BEB4 398 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-211ENST00000554310 OR56A1Q8NGH5 318 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 OR14L1PQ8NHC6 308 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 GPR151Q8TDV0 419 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 MARVELD3Q96A59 401 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 MOAP1Q96BY2 351 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 FAM120BQ96EK7 910 aaKnown RBP11.89□□□□□ -0.51
SHMT2-211ENST00000554310 RMND5BQ96G75 393 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-211ENST00000554310 PPP1R36Q96LQ0 422 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 TIMP4Q99727 224 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 DUSP26Q9BV47 211 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 UGT2B28Q9BY64 529 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 NUF2Q9BZD4 464 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 AKTIPQ9H8T0 292 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 MEAF6Q9HAF1 191 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 HHATLQ9HCP6 504 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 SDHAF3Q9NRP4 125 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 PPP4R1LQ9P1A2 415 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 DKKL1Q9UK85 242 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 CACNA1DQ01668 2161 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 MED12Q93074 2177 aa11.89□□□□□ -0.51
SHMT2-211ENST00000554310 MYO9AB2RTY4 2548 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 AHRRA9YTQ3 701 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 B2RBV5 119 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 SCO2O43819 266 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 FADS1O60427 444 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 ALOX5P09917 674 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 ACP2P11117 423 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 BMP7P18075 431 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 LBPP18428 481 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 EFNA1P20827 205 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-211ENST00000554310 LCN1P31025 176 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 RFX3P48380 749 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 CLK3P49761 638 aaKnown RBP11.88□□□□□ -0.51
SHMT2-211ENST00000554310 GAS1P54826 345 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 DIO3P55073 304 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.88□□□□□ -0.51
SHMT2-211ENST00000554310 EXOSC6Q5RKV6 272 aaKnown RBP11.88□□□□□ -0.51
SHMT2-211ENST00000554310 RIPPLY2Q5TAB7 128 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 OGFOD2Q6N063 350 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 YRDCQ86U90 279 aaKnown RBP11.88□□□□□ -0.51
SHMT2-211ENST00000554310 IFNEQ86WN2 208 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 COX18Q8N8Q8 333 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 OR4K17Q8NGC6 315 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 LILRB4Q8NHJ6 448 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 FBXO30Q8TB52 745 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 SFXN5Q8TD22 340 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 PIK3R3Q92569 461 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 SLC9A6Q92581 669 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 JADE3Q92613 823 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 ABTB1Q969K4 478 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-211ENST00000554310 MAELQ96JY0 434 aaKnown RBP11.88□□□□□ -0.51
SHMT2-211ENST00000554310 STACQ99469 402 aa11.88□□□□□ -0.51
SHMT2-211ENST00000554310 MRGBPQ9NV56 204 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms