RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 CSPG4Q6UVK1 2322 aa2.84□□□□□ -1.96
SLIRP-202ENST00000553981 ANKHD1Q8IWZ3 2542 aaKnown RBP2.83□□□□□ -1.96
SLIRP-202ENST00000553981 CENPEQ02224 2701 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 LRIT2A6NDA9 550 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 SDR42E2A6NKP2 422 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 USP27XA6NNY8 438 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 ERI2A8K979 691 aaKnown RBP2.83□□□□□ -1.96
SLIRP-202ENST00000553981 A8MXE2 369 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 GOLGA8MH3BSY2 632 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 TXNDC9O14530 226 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 BCKDKO14874 412 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 KPNA5O15131 536 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 SPRY2O43597 315 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 ZBTB14O43829 449 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 HCN1O60741 890 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 WDR1O75083 606 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 ZFAND5O76080 213 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 CCNDBP1O95273 360 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 GUCA1CO95843 209 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 CGAP01215 116 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 C1QAP02745 245 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 T-ENOLP0DO92 83 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 RNH1P13489 461 aaKnown RBP2.83□□□□□ -1.96
SLIRP-202ENST00000553981 TPSB2P20231 275 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 TNFRSF1BP20333 461 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 S1PR1P21453 382 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 IL10P22301 178 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 STIP1P31948 543 aaKnown RBP2.83□□□□□ -1.96
SLIRP-202ENST00000553981 TIMP3P35625 211 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 CDKN2AP42771 156 aaKnown RBP2.83□□□□□ -1.96
SLIRP-202ENST00000553981 MAGEA6P43360 314 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 SLC6A12P48065 614 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 NPY2RP49146 381 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 VPS41P49754 854 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 PLA2G16P53816 162 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 HNRNPH2P55795 449 aaKnown RBP2.83□□□□□ -1.96
SLIRP-202ENST00000553981 FBXW4P57775 412 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 TAS2R50P59544 299 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 BASP1P80723 227 aaKnown RBP2.83□□□□□ -1.96
SLIRP-202ENST00000553981 IGLV3-21P80748 117 aaPredicted RBP2.83□□□□□ -1.96
SLIRP-202ENST00000553981 CCZ1BP86790 482 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 CCZ1P86791 482 aaPredicted RBP2.83□□□□□ -1.96
SLIRP-202ENST00000553981 CCNIQ14094 377 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 DHX34Q14147 1143 aaKnown RBP2.83□□□□□ -1.96
SLIRP-202ENST00000553981 HERC3Q15034 1050 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 RBBP5Q15291 538 aaKnown RBP2.83□□□□□ -1.96
SLIRP-202ENST00000553981 TPSAB1Q15661 275 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 HSP90AA5PQ58FG0 334 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 SHEQ5VZ18 495 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 NSUN5P2Q63ZY6 315 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 C18orf63Q68DL7 685 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 DUPD1Q68J44 220 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 ZNF470Q6ECI4 717 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 TTC23LQ6PF05 361 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 RTL4Q6ZR62 310 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 DNM1P46Q6ZS02 220 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 Q6ZTC4 211 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 FAM47EQ6ZV65 393 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 ABHD13Q7L211 337 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 TAOK1Q7L7X3 1001 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 CAMKMTQ7Z624 323 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 TMPRSS11BQ86T26 416 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 LUZP2Q86TE4 346 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 YRDCQ86U90 279 aaKnown RBP2.83□□□□□ -1.96
SLIRP-202ENST00000553981 THOC6Q86W42 341 aaKnown RBP2.83□□□□□ -1.96
SLIRP-202ENST00000553981 C17orf64Q86WR6 236 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 P3H2Q8IVL5 708 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 KLHDC8AQ8IYD2 350 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 PRR22Q8IZ63 422 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 GCNT2Q8N0V5 402 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 CLYBLQ8N0X4 340 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 SPATA6LQ8N4H0 392 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 HORMAD2Q8N7B1 307 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 NAT8LQ8N9F0 302 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 GOT1L1Q8NHS2 421 aaPredicted RBP2.83□□□□□ -1.96
SLIRP-202ENST00000553981 MPLKIPQ8TAP9 179 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 SLC5A11Q8WWX8 675 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 ATL1Q8WXF7 558 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 KCNJ9Q92806 393 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 ADIPOR1Q96A54 375 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 FBXL8Q96CD0 374 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 STARD4Q96DR4 205 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 IQCDQ96DY2 449 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 HSPBAP1Q96EW2 488 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 LINGO1Q96FE5 620 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 PERPQ96FX8 193 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 FOPNLQ96NB1 174 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 SERPINB12Q96P63 405 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 ALS2CR12Q96Q35 445 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 F2RL3Q96RI0 385 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 NODALQ96S42 347 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 FAM173AQ9BQD7 235 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 OR8D2Q9GZM6 311 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 IL22Q9GZX6 179 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 PARVBQ9HBI1 364 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 ACKR4Q9NPB9 350 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 ADAP2Q9NPF8 381 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 EIF2B3Q9NR50 452 aaKnown RBP2.83□□□□□ -1.96
SLIRP-202ENST00000553981 SNX15Q9NRS6 342 aa2.83□□□□□ -1.96
SLIRP-202ENST00000553981 HOMER3Q9NSC5 361 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms