RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 ARAFP10398 606 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 RPL3P39023 403 aaKnown RBP8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 CCR8P51685 355 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 CDH12P55289 794 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 PCBP3P57721 371 aaKnown RBP8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 REEP5Q00765 189 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 ARHGAP19Q14CB8 494 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 EXOC3L2Q2M3D2 409 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 TRIM40Q6P9F5 258 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 IKBIPQ70UQ0 350 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 GHDCQ8N2G8 530 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 HORMAD2Q8N7B1 307 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 OR4D10Q8NGI6 311 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 OR8D4Q8NGM9 314 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 SMPDL3AQ92484 453 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 YIPF5Q969M3 257 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 NIPSNAP1Q9BPW8 284 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 SLC28A3Q9HAS3 691 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 IMP3Q9NV31 184 aaKnown RBP8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 SLC9A8Q9Y2E8 581 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 K7EQS6 105 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 GNB5O14775 395 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 CHP2O43745 196 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 APODP05090 189 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 FABP1P07148 127 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 VSX2P58304 361 aaPredicted RBP8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 CSNK1G2P78368 415 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 SPIBQ01892 262 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 CRYZQ08257 329 aaKnown RBP8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 RBBP4Q09028 425 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 ADAM15Q13444 863 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 GANABQ14697 944 aaKnown RBP8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 ETFDHQ16134 617 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 CRB2Q5IJ48 1285 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 TNFAIP8L2Q6P589 184 aaPredicted RBP8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 ASB18Q6ZVZ8 466 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 CDH26Q8IXH8 852 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 B3GNT7Q8NFL0 401 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 OR9Q2Q8NGE9 314 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 COQ8AQ8NI60 647 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 NANPQ8TBE9 248 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 EXOSC8Q96B26 276 aaKnown RBP8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 NXPE2Q96DL1 559 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 OTUB1Q96FW1 271 aaPredicted RBP8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 WDFY2Q96P53 400 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 TEFMQ96QE5 360 aaKnown RBP8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 PITX2Q99697 317 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 MARVELD1Q9BSK0 173 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 RHCGQ9UBD6 479 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 ICKQ9UPZ9 632 aa8.47□□□□□ -1.05
AL049839.2-201ENST00000553947 HEATR5BQ9P2D3 2071 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 A0A0G2JPF8 293 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 TCRBV16S1A1N1A0A5B0 115 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 HNRNPCL3B7ZW38 293 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 PRKRAO75569 313 aaKnown RBP8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 SERPIND1P05546 499 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 CEACAM5P06731 702 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 HNRNPCL4P0DMR1 293 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 UQCRC2P22695 453 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 MAT2AP31153 395 aaKnown RBP8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 PTGER1P34995 402 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 HSPB3Q12988 150 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 TCEA2Q15560 299 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 ZNF630Q2M218 657 aaPredicted RBP8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 LGALSLQ3ZCW2 172 aaPredicted RBP8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 CEACAM20Q6UY09 585 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 ADCK2Q7Z695 626 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 STPG2Q8N412 459 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 OR10G2Q8NGC3 310 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 OR2A1Q8NGT9 310 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 RAB8BQ92930 207 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 HRASLS5Q96KN8 279 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 CAMK1GQ96NX5 476 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 GABARAPL3Q9BY60 117 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 MIXL1Q9H2W2 232 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 KLHL31Q9H511 634 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 SYNPO2LQ9H987 977 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 SIRT3Q9NTG7 399 aaPredicted RBP8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 LYARQ9NX58 379 aaKnown RBP8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 AHSPQ9NZD4 102 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 CKAP5Q14008 2032 aa8.46□□□□□ -1.05
AL049839.2-201ENST00000553947 A0A1W2PQU0 124 aa8.46□□□□□ -1.06
AL049839.2-201ENST00000553947 C4orf51C9J302 202 aa8.46□□□□□ -1.06
AL049839.2-201ENST00000553947 NDUFS4O43181 175 aa8.46□□□□□ -1.06
AL049839.2-201ENST00000553947 HCN1O60741 890 aa8.46□□□□□ -1.06
AL049839.2-201ENST00000553947 ECDO95905 644 aaPredicted RBP8.46□□□□□ -1.06
AL049839.2-201ENST00000553947 RPN2P04844 631 aa8.46□□□□□ -1.06
AL049839.2-201ENST00000553947 C5AR1P21730 350 aa8.46□□□□□ -1.06
AL049839.2-201ENST00000553947 KIR2DL1P43626 348 aaPredicted RBP8.46□□□□□ -1.06
AL049839.2-201ENST00000553947 ARHGDIBP52566 201 aa8.46□□□□□ -1.06
AL049839.2-201ENST00000553947 MANFP55145 182 aaKnown RBP8.46□□□□□ -1.06
AL049839.2-201ENST00000553947 PUM1Q14671 1186 aaKnown RBP eCLIP8.46□□□□□ -1.06
AL049839.2-201ENST00000553947 AGERQ15109 404 aa8.46□□□□□ -1.06
AL049839.2-201ENST00000553947 SSX1Q16384 188 aa8.46□□□□□ -1.06
AL049839.2-201ENST00000553947 ATCAYQ86WG3 371 aa8.46□□□□□ -1.06
AL049839.2-201ENST00000553947 TMEM145Q8NBT3 493 aa8.46□□□□□ -1.06
AL049839.2-201ENST00000553947 KCT2Q8NC54 265 aa8.46□□□□□ -1.06
AL049839.2-201ENST00000553947 DUSP18Q8NEJ0 188 aa8.46□□□□□ -1.06
AL049839.2-201ENST00000553947 C9orf43Q8TAL5 461 aaPredicted RBP8.46□□□□□ -1.06
AL049839.2-201ENST00000553947 TEX47Q8TBZ9 253 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms