RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 SLC16A11Q8NCK7 471 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 PAPD5Q8NDF8 572 aaKnown RBP13.37□□□□□ -0.27
SHMT2-208ENST00000553868 FBXO30Q8TB52 745 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 GPR151Q8TDV0 419 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 HOXB13Q92826 284 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-208ENST00000553868 SLC35A4Q96G79 324 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 PYURFQ96I23 114 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 LMF2Q9BU23 707 aaKnown RBP13.37□□□□□ -0.27
SHMT2-208ENST00000553868 BTBD2Q9BX70 525 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 OR8D2Q9GZM6 311 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 AKIRIN1Q9H9L7 192 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-208ENST00000553868 FOLH1BQ9HBA9 442 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 POLE3Q9NRF9 147 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 OSGIN2Q9Y236 505 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 PCDHGA6Q9Y5G7 932 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 SPTBP11277 2137 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 OR6C76A6NM76 312 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 M0QX08 132 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 PRKD3O94806 890 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 NKX2-2O95096 273 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 ITGA3P26006 1051 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 AQP1P29972 269 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 SSTR4P31391 388 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 FOLR3P41439 243 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 EMDP50402 254 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 DCAF7P61962 342 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 PSPHP78330 225 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 POU6F2P78424 691 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-208ENST00000553868 SYPL1Q16563 259 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 DUSP5Q16690 384 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 ARHGAP11BQ3KRB8 267 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 CYBRD1Q53TN4 286 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 SFT2D3Q587I9 215 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 FAAH2Q6GMR7 532 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 LCN10Q6JVE6 187 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 TMEM205Q6UW68 189 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 LRRC74BQ6ZQY2 392 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 ZNF615Q8N8J6 731 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 ANKFN1Q8N957 763 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 CHDHQ8NE62 594 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-208ENST00000553868 OR2Y1Q8NGV0 311 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 SLC2A12Q8TD20 617 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 DOK4Q8TEW6 326 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 PMM1Q92871 262 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 CDS1Q92903 461 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 SLC47A1Q96FL8 570 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 VPS50Q96JG6 964 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 LPAR4Q99677 370 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 TREX2Q9BQ50 279 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-208ENST00000553868 Q9N2J8 555 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 BAG5Q9UL15 447 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 PTRH2Q9Y3E5 179 aaKnown RBP13.36□□□□□ -0.27
SHMT2-208ENST00000553868 ZGRF1Q86YA3 2104 aa13.36□□□□□ -0.27
SHMT2-208ENST00000553868 SAGE2PA6NJ88 616 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 A8MVJ9 347 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 H3BNX3 289 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 CEACAM4O75871 244 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 GUSBP08236 651 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 FASP25445 335 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 GABRA3P34903 492 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 TRHRP34981 398 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-208ENST00000553868 MAP3K8P41279 467 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 PER3P56645 1201 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 RPS15P62841 145 aaKnown RBP13.35□□□□□ -0.27
SHMT2-208ENST00000553868 HLA-DQA1Q5Y7H0 255 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 FAM199XQ6PEV8 388 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-208ENST00000553868 LANCL3Q6ZV70 420 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 FKBP9P1Q75LS8 142 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 SLC29A4Q7RTT9 530 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 CPEB2Q7Z5Q1 589 aaKnown RBP13.35□□□□□ -0.27
SHMT2-208ENST00000553868 ARMC8Q8IUR7 673 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 ZNF295-AS1Q8N0V1 137 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 PQLC1Q8N2U9 271 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 OR1N1Q8NGS0 311 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 C16orf52Q8NHV5 167 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 THAP4Q8WY91 577 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 OTUB1Q96FW1 271 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-208ENST00000553868 VSTM2LQ96N03 204 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 SEPHS2Q99611 448 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 DOHHQ9BU89 302 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 MRTO4Q9UKD2 239 aaKnown RBP13.35□□□□□ -0.27
SHMT2-208ENST00000553868 V9GYQ6 96 aa13.35□□□□□ -0.27
SHMT2-208ENST00000553868 C21orf140B9A014 251 aa13.34□□□□□ -0.27
SHMT2-208ENST00000553868 CNOT3O75175 753 aaKnown RBP13.34□□□□□ -0.27
SHMT2-208ENST00000553868 STX11O75558 287 aa13.34□□□□□ -0.27
SHMT2-208ENST00000553868 H6PDO95479 791 aa13.34□□□□□ -0.27
SHMT2-208ENST00000553868 IGKV3-11P04433 115 aa13.34□□□□□ -0.27
SHMT2-208ENST00000553868 ATP6V1C1P21283 382 aa13.34□□□□□ -0.27
SHMT2-208ENST00000553868 PTGER4P35408 488 aa13.34□□□□□ -0.27
SHMT2-208ENST00000553868 PPICP45877 212 aa13.34□□□□□ -0.27
SHMT2-208ENST00000553868 EFNA3P52797 238 aa13.34□□□□□ -0.27
SHMT2-208ENST00000553868 SLC37A1P57057 533 aa13.34□□□□□ -0.27
SHMT2-208ENST00000553868 SELENOWP63302 87 aa13.34□□□□□ -0.27
SHMT2-208ENST00000553868 DUSP8Q13202 625 aa13.34□□□□□ -0.27
SHMT2-208ENST00000553868 DCST2Q5T1A1 773 aa13.34□□□□□ -0.27
SHMT2-208ENST00000553868 PAPD4Q6PIY7 484 aaKnown RBP13.34□□□□□ -0.27
SHMT2-208ENST00000553868 ENPP6Q6UWR7 440 aa13.34□□□□□ -0.27
SHMT2-208ENST00000553868 SIMC1Q8NDZ2 872 aa13.34□□□□□ -0.27
SHMT2-208ENST00000553868 B3GNT7Q8NFL0 401 aa13.34□□□□□ -0.27
SHMT2-208ENST00000553868 SPPL2AQ8TCT8 520 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms