RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 GLRA1P23415 457 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 GJB2P29033 226 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 SFNP31947 248 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 MAGEB1P43366 347 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 NSFP46459 744 aaKnown RBP2.66□□□□□ -1.98
SCFD1-210ENST00000553693 GAMTQ14353 236 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 MEF2DQ14814 521 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 TPD52L1Q16890 204 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-210ENST00000553693 WDR25Q64LD2 544 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-210ENST00000553693 WSCD1Q658N2 575 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 TAF8Q7Z7C8 310 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 NBPF5PQ86XG9 351 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-210ENST00000553693 FBXO16Q8IX29 292 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-210ENST00000553693 SFRP1Q8N474 314 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 MRPL43Q8N983 215 aaKnown RBP2.66□□□□□ -1.98
SCFD1-210ENST00000553693 ZNF671Q8TAW3 534 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 SYAP1Q96A49 352 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-210ENST00000553693 SLCO4A1Q96BD0 722 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 FAM122AQ96E09 287 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 OR5M11Q96RB7 305 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 KCNK16Q96T55 309 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 DDX50Q9BQ39 737 aaKnown RBP2.66□□□□□ -1.98
SCFD1-210ENST00000553693 RAB17Q9H0T7 212 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 MYOZ2Q9NPC6 264 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 TIGARQ9NQ88 270 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 HOMER3Q9NSC5 361 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 MIS18AQ9NYP9 233 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 TRMT6Q9UJA5 497 aaKnown RBP2.66□□□□□ -1.98
SCFD1-210ENST00000553693 PLA2G4CQ9UP65 541 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 NPC1L1Q9UHC9 1359 aa2.65□□□□□ -1.98
SCFD1-210ENST00000553693 SCN11AQ9UI33 1791 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 ARFGEF2Q9Y6D5 1785 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 ATP6AP2A0A1C7CYW4 349 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 MAGEB16A2A368 324 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 EEF2KO00418 725 aaKnown RBP2.65□□□□□ -1.99
SCFD1-210ENST00000553693 SYT7O43581 403 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 TRIM16O95361 564 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 HEXBP07686 556 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 ETS1P14921 441 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 ZNF32P17041 273 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 NUMBP49757 651 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 ARHGDIAP52565 204 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 HNRNPFP52597 415 aaKnown RBP2.65□□□□□ -1.99
SCFD1-210ENST00000553693 MFAP2P55001 183 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 UCNP55089 124 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 MTTPP55157 894 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 UCP2P55851 309 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 STX17P56962 302 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 SRP54P61011 504 aaKnown RBP2.65□□□□□ -1.99
SCFD1-210ENST00000553693 SSTP61278 116 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 TAF7Q15545 349 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-210ENST00000553693 TGIF1Q15583 401 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 HFEQ30201 348 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 UNC50Q53HI1 259 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 IRGCQ6NXR0 463 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 NHLRC1Q6VVB1 395 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 APOBEC3FQ8IUX4 373 aaKnown RBP2.65□□□□□ -1.99
SCFD1-210ENST00000553693 CNNM3Q8NE01 707 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 ZNF564Q8TBZ8 553 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-210ENST00000553693 SPATA18Q8TC71 538 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 SETD7Q8WTS6 366 aaKnown RBP2.65□□□□□ -1.99
SCFD1-210ENST00000553693 FCGR1BQ92637 280 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 GGHQ92820 318 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 PCED1BQ96HM7 432 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 MAGEF1Q9HAY2 307 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 IL1RL2Q9HB29 575 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 NDUFA13Q9P0J0 144 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 RPS6KB2Q9UBS0 482 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 KCNN3Q9UGI6 736 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 EXOC7Q9UPT5 735 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 KCNK6Q9Y257 313 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 OR1A2Q9Y585 309 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 COL6A3P12111 3177 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 ATP8B3O60423 1300 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 ANKRD26Q9UPS8 1709 aa2.65□□□□□ -1.99
SCFD1-210ENST00000553693 BCORQ6W2J9 1755 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 SZT2Q5T011 3432 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 KIF20BQ96Q89 1820 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 A0A087X0K7 114 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 ZFP92A6NM28 416 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 CHUKO15111 745 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 DUSP14O95147 198 aaKnown RBP2.64□□□□□ -1.99
SCFD1-210ENST00000553693 AKR7A3O95154 331 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 GJB5O95377 273 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 CAMLGP49069 296 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 ZNF133P52736 654 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-210ENST00000553693 YBEYP58557 167 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-210ENST00000553693 STARD6P59095 220 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 HTD2P86397 168 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 SLC10A1Q14973 349 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 DDI2Q5TDH0 399 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 RAET1GQ6H3X3 334 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 NEK5Q6P3R8 708 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 AFTPHQ6ULP2 937 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 CD164L2Q6UWJ8 174 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 MOB2Q70IA6 237 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 GPR137CQ8N3F9 429 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 CHDHQ8NE62 594 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-210ENST00000553693 OR4A16Q8NH70 328 aa2.64□□□□□ -1.99
SCFD1-210ENST00000553693 CRYGNQ8WXF5 182 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms