RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 TIGD3Q6B0B8 471 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 DLEU7Q6UYE1 221 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 BNC2Q6ZN30 1099 aaPredicted RBP12.66□□□□□ -0.38
TUBB3-202ENST00000553656 ZAR1Q86SH2 424 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 MISPQ8IVT2 679 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 MSRB3Q8IXL7 192 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 TMEM251Q8N6I4 163 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 POU5F2Q8N7G0 328 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 ZNF614Q8N883 585 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 OR4K17Q8NGC6 315 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 TRNT1Q96Q11 434 aaKnown RBP12.66□□□□□ -0.38
TUBB3-202ENST00000553656 CGREF1Q99674 301 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 SH3GL1Q99961 368 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 SLX1AQ9BQ83 275 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 CPPED1Q9BRF8 314 aaPredicted RBP12.66□□□□□ -0.38
TUBB3-202ENST00000553656 THUMPD3Q9BV44 507 aaKnown RBP12.66□□□□□ -0.38
TUBB3-202ENST00000553656 ZNF350Q9GZX5 532 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 MYLK2Q9H1R3 596 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 FBXO34Q9NWN3 711 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 CALML5Q9NZT1 146 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 SEC14L3Q9UDX4 400 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 TRBV5-3A0A0A0MS03 114 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 NPIPA5A0A0B4J1W7 369 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 LRRC3CA6NJW4 275 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 ALG1L2C9J202 215 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 C5orf58C9J3I9 102 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 NPIPA7E9PJI5 369 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 FBP2O00757 339 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 FADS1O60427 444 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 CDC40O60508 579 aaKnown RBP eCLIP12.65□□□□□ -0.38
TUBB3-202ENST00000553656 GUSBP08236 651 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 NPIPA8P0DM63 369 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 ENDOUP21128 410 aaKnown RBP12.65□□□□□ -0.38
TUBB3-202ENST00000553656 MST1P26927 711 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 PTGDSP41222 190 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 MAGEA5P43359 124 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 MVDP53602 400 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 CRISP3P54108 245 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 RBPJQ06330 500 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 C17orf67Q0P5P2 114 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 ART3Q13508 389 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 CAPRIN1Q14444 709 aaKnown RBP12.65□□□□□ -0.38
TUBB3-202ENST00000553656 HYAL4Q2M3T9 481 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 KRTCAP3Q53RY4 240 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 RNFT1Q5M7Z0 435 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 ZNF324BQ6AW86 544 aaPredicted RBP12.65□□□□□ -0.38
TUBB3-202ENST00000553656 GFRALQ6UXV0 394 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 MARCH3Q86UD3 253 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 PLCZ1Q86YW0 608 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 ZNF619Q8N2I2 560 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 OR4C3Q8NH37 302 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 RNF138Q8WVD3 245 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 MIB2Q96AX9 1013 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 RCN3Q96D15 328 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 GPR137Q96N19 417 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 ANKRD27Q96NW4 1050 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 GNRHR2Q96P88 292 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 BARD1Q99728 777 aaKnown RBP12.65□□□□□ -0.38
TUBB3-202ENST00000553656 EXO5Q9H790 373 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 ZNF703Q9H7S9 590 aaPredicted RBP12.65□□□□□ -0.38
TUBB3-202ENST00000553656 QPCTLQ9NXS2 382 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 MKLN1Q9UL63 735 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 C15orf41Q9Y2V0 281 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 GMEB1Q9Y692 573 aa12.65□□□□□ -0.38
TUBB3-202ENST00000553656 AIM2O14862 343 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 KIAA0513O60268 411 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 TRAPPC6AO75865 159 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 H6PDO95479 791 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 ANGPTL1O95841 491 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 BCHEP06276 602 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 PRDX6P30041 224 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 GCKP35557 465 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 MTPNP58546 118 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 FOXK1P85037 733 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 SLC10A1Q14973 349 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 SYPL1Q16563 259 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 CYP51A1Q16850 503 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 ZNF630Q2M218 657 aaPredicted RBP12.64□□□□□ -0.39
TUBB3-202ENST00000553656 RUNDC3AQ59EK9 446 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 OR5M10Q6IEU7 315 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 LRRC74BQ6ZQY2 392 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 SIAH3Q8IW03 269 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 GHDCQ8N2G8 530 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 ANKFN1Q8N957 763 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 GATSQ8NAP1 163 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 GALNT11Q8NCW6 608 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 ST6GALNAC3Q8NDV1 305 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 PHOSPHO1Q8TCT1 267 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 BCAS4Q8TDM0 211 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 OIT3Q8WWZ8 545 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 LRRC58Q96CX6 371 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 DEFB127Q9H1M4 99 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 LDAHQ9H6V9 325 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 PTGES2Q9H7Z7 377 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 EFCAB1Q9HAE3 211 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 A4GALTQ9NPC4 353 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 DKKL1Q9UK85 242 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 DTNAQ9Y4J8 743 aa12.64□□□□□ -0.39
TUBB3-202ENST00000553656 C15orf38-AP3S2A0A0A6YYH1 394 aa12.63□□□□□ -0.39
TUBB3-202ENST00000553656 A0A1W2PQD3 144 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms