RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 GPR85P60893 370 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 CHRNEQ04844 493 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 SNTA1Q13424 505 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 INPP5JQ15735 1006 aaPredicted RBP13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 ZNF141Q15928 474 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 PRAMEF20Q5VT98 475 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 LRRC74BQ6ZQY2 392 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 SERPINA11Q86U17 422 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 PTRH1Q86Y79 214 aaKnown RBP13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 ZFP62Q8NB50 900 aaPredicted RBP13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 OR2M7Q8NG81 312 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 SLC39A7Q92504 469 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 TMEM19Q96HH6 336 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 NSL1Q96IY1 281 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 C5orf34Q96MH7 638 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 HOPXQ9BPY8 73 aaPredicted RBP13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 TREX2Q9BQ50 279 aaPredicted RBP13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 GALNT9Q9HCQ5 603 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 POLE3Q9NRF9 147 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 SACM1LQ9NTJ5 587 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 THUMPD1Q9NXG2 353 aaKnown RBP13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 TUBA8Q9NY65 449 aaPredicted RBP13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 LUZP4Q9P127 313 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 MRTO4Q9UKD2 239 aaKnown RBP13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 ABCG2Q9UNQ0 655 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 USP22Q9UPT9 525 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 CORO2BQ9UQ03 480 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 KLF13Q9Y2Y9 288 aaPredicted RBP13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 NCKAP5O14513 1909 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 IGLV3-32A0A0A0MS00 114 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 EVPLLA8MZ36 301 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 STX11O75558 287 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 UGT2B17O75795 530 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 WISP2O76076 250 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 DCTP40126 519 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 RFX3P48380 749 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 DNASE1L1P49184 302 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 ANXA11P50995 505 aaKnown RBP13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 ATP12AP54707 1039 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 PCBP3P57721 371 aaKnown RBP13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 PSME3P61289 254 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 PMP22Q01453 160 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 CD226Q15762 336 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 INAQ16352 499 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 HYAL4Q2M3T9 481 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 KLHL26Q53HC5 615 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 GCNT6Q5T4J0 391 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 ATAD3BQ5T9A4 648 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 PRAMEF8Q5VWM4 474 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 PRAMEF7Q5VXH5 474 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 ZNF324BQ6AW86 544 aaPredicted RBP13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 C16orf62Q7Z3J2 963 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 WDSUB1Q8N9V3 476 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 TMEM178AQ8NBL3 297 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 OR10A6Q8NH74 314 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 TMCO6Q96DC7 493 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 THUMPD3Q9BV44 507 aaKnown RBP13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 UBQLN4Q9NRR5 601 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 TMEM181Q9P2C4 612 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 P2RX2Q9UBL9 471 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 RALYQ9UKM9 306 aaKnown RBP13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 MKLN1Q9UL63 735 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 CHST2Q9Y4C5 530 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 ZNF462Q96JM2 2506 aa13.57□□□□□ -0.24
MTHFD1-204ENST00000553405 C15orf38-AP3S2A0A0A6YYH1 394 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 A0A1W2PQD3 144 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 OIP5O43482 229 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 P04436 131 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 BCHEP06276 602 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 CALB2P22676 271 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 KRT20P35900 424 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 MEOX1P50221 254 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 SLC7A2P52569 658 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 CRYBA2P53672 197 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 SLC25A3Q00325 362 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 FLYWCH1Q4VC44 716 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 PRR30Q53SZ7 412 aaPredicted RBP13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 RPS26P11Q5JNZ5 115 aaPredicted RBP13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 TBCELQ5QJ74 424 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 SLC30A6Q6NXT4 461 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 ARPINQ7Z6K5 226 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 SIAH3Q8IW03 269 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 ZNF619Q8N2I2 560 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 METTL25Q8N6Q8 603 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 TEX19Q8NA77 164 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 RBM15BQ8NDT2 890 aaKnown RBP13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 OIT3Q8WWZ8 545 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 TMEM41AQ96HV5 264 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 KLHDC3Q9BQ90 382 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 FAM173AQ9BQD7 235 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 OSBPL11Q9BXB4 747 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 QRSL1Q9H0R6 528 aaKnown RBP13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 UBQLN3Q9H347 655 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 WDR45Q9Y484 360 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 WIF1Q9Y5W5 379 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 SHANK1Q9Y566 2161 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 PCNX3Q9H6A9 2034 aa13.56□□□□□ -0.24
MTHFD1-204ENST00000553405 AGAP5A6NIR3 686 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 SNPHO15079 494 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms