RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 CYP27C1Q4G0S4 372 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 NCMAPQ5T1S8 102 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 UBAP2Q5T6F2 1119 aaKnown RBP8.1□□□□□ -1.11
SYNE2-209ENST00000553308 MFSD12Q6NUT3 480 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 TMEM107Q6UX40 140 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 ZDHHC24Q6UX98 284 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 APOOLQ6UXV4 268 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 GALNT10Q86SR1 603 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 STK32CQ86UX6 486 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 SAMD14Q8IZD0 417 aaPredicted RBP8.1□□□□□ -1.11
SYNE2-209ENST00000553308 CEP112Q8N8E3 955 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 ZNF483Q8TF39 744 aaPredicted RBP8.1□□□□□ -1.11
SYNE2-209ENST00000553308 C16orf78Q8WTQ4 265 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 SLC9A6Q92581 669 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 NAPGQ99747 312 aaPredicted RBP8.1□□□□□ -1.11
SYNE2-209ENST00000553308 EBPLQ9BY08 206 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 TBL1XR1Q9BZK7 514 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 TMEM185BQ9H7F4 350 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 FANCFQ9NPI8 374 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 GIMAP4Q9NUV9 329 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 NMRK1Q9NWW6 199 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 VPS29Q9UBQ0 182 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 MCTS1Q9ULC4 181 aaKnown RBP8.1□□□□□ -1.11
SYNE2-209ENST00000553308 CUBNO60494 3623 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 ANK3Q12955 4377 aaKnown RBP8.09□□□□□ -1.11
SYNE2-209ENST00000553308 IGHV4-30-2A0A087WSY4 118 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 A0A096LNT2 108 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 IGLV3-32A0A0A0MS00 114 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 MANBAO00462 879 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 TNFSF11O14788 317 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 SMIM24O75264 130 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 UTS2O95399 124 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 SYNGR4O95473 234 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 IL33O95760 270 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 ANGPTL1O95841 491 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 IGKV1D-16P01601 117 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 JUNP05412 331 aaKnown RBP8.09□□□□□ -1.11
SYNE2-209ENST00000553308 TUBBP07437 444 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 RBP1P09455 135 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 ZNF17P17021 662 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 TIA1P31483 386 aaKnown RBP eCLIP8.09□□□□□ -1.11
SYNE2-209ENST00000553308 MPIP34949 423 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 CLK3P49761 638 aaKnown RBP8.09□□□□□ -1.11
SYNE2-209ENST00000553308 HTR6P50406 440 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 NCBP2P52298 156 aaKnown RBP eCLIP8.09□□□□□ -1.11
SYNE2-209ENST00000553308 GNG11P61952 73 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 GUCY2DQ02846 1103 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 BSPH1Q075Z2 132 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 C2orf54Q08AI8 447 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 C17orf67Q0P5P2 114 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 CSTF3Q12996 717 aaKnown RBP8.09□□□□□ -1.11
SYNE2-209ENST00000553308 TAB1Q15750 504 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 GRAMD1BQ3KR37 738 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 C6orf52Q5T4I8 152 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 FIGNL1Q6PIW4 674 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 SEZ6L2Q6UXD5 910 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 TFAP2EQ6VUC0 442 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 WDR75Q8IWA0 830 aaKnown RBP8.09□□□□□ -1.11
SYNE2-209ENST00000553308 GABRG1Q8N1C3 465 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 CDYL2Q8N8U2 506 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 STEAP2Q8NFT2 490 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 OR2V1Q8NHB1 315 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 APIPQ96GX9 242 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 HS6ST2Q96MM7 605 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 RNF145Q96MT1 663 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 BBS4Q96RK4 519 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 KLHDC3Q9BQ90 382 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 TRAF4Q9BUZ4 470 aaPredicted RBP8.09□□□□□ -1.11
SYNE2-209ENST00000553308 ACPTQ9BZG2 426 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 KCNF1Q9H3M0 494 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 Q9N2J8 555 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 GLRX2Q9NS18 164 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 FBXO34Q9NWN3 711 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 DMGDHQ9UI17 866 aaKnown RBP8.09□□□□□ -1.11
SYNE2-209ENST00000553308 TMCO1Q9UM00 188 aa8.09□□□□□ -1.11
SYNE2-209ENST00000553308 C19orf53Q9UNZ5 99 aaPredicted RBP8.09□□□□□ -1.11
SYNE2-209ENST00000553308 A0A087WV62 115 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 A0A0J9YW62 118 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 GXYLT2A0PJZ3 443 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 A8MT66 165 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 MYO1GB0I1T2 1018 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 UPK1AO00322 258 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 ADAMDEC1O15204 470 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 SSX4O60224 188 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 PSMG1O95456 288 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 CD8AP01732 235 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 SBK3P0C264 359 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 HSD3B1P14060 373 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 PTNP21246 168 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 IL32P24001 234 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 PSMA4P25789 261 aaKnown RBP8.08□□□□□ -1.12
SYNE2-209ENST00000553308 HSD3B2P26439 372 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 SHC1P29353 583 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 MAGEA12P43365 314 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 PRR5P85299 388 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 SRSF2Q01130 221 aaKnown RBP8.08□□□□□ -1.12
SYNE2-209ENST00000553308 ACSM2AQ08AH3 577 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 HEPACAMQ14CZ8 416 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 PLPPR5Q32ZL2 321 aa8.08□□□□□ -1.12
SYNE2-209ENST00000553308 ACSM2BQ68CK6 577 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms