RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 FGFRL1Q8N441 504 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 SLC44A3Q8N4M1 653 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 ARL14EPQ8N8R7 260 aaPredicted RBP3.78□□□□□ -1.8
USP44-208ENST00000552440 LRRC57Q8N9N7 239 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 KBTBD3Q8NAB2 608 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 NOA1Q8NC60 698 aaKnown RBP3.78□□□□□ -1.8
USP44-208ENST00000552440 NPEPL1Q8NDH3 523 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 ZNF248Q8NDW4 579 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 STXBP6Q8NFX7 210 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 OR1L6Q8NGR2 347 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 TSACCQ96A04 125 aaPredicted RBP3.78□□□□□ -1.8
USP44-208ENST00000552440 ECHDC3Q96DC8 303 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 SCRN2Q96FV2 425 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 TMEM19Q96HH6 336 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 MED30Q96HR3 178 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 CPB2Q96IY4 423 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 SLC38A2Q96QD8 506 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 AGPAT1Q99943 283 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 P2RY13Q9BPV8 354 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 SYT11Q9BT88 431 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 RAB11FIP5Q9BXF6 653 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 RHOJQ9H4E5 214 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 ASB8Q9H765 288 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 METTL8Q9H825 291 aaKnown RBP3.78□□□□□ -1.8
USP44-208ENST00000552440 CLK4Q9HAZ1 481 aaKnown RBP3.78□□□□□ -1.8
USP44-208ENST00000552440 SLC38A10Q9HBR0 1119 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 MLXIPLQ9NP71 852 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 SPAG4Q9NPE6 437 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 C1orf123Q9NWV4 160 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 ELOVL2Q9NXB9 296 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 PAQR5Q9NXK6 330 aaPredicted RBP3.78□□□□□ -1.8
USP44-208ENST00000552440 ASIC3Q9UHC3 531 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 PILRAQ9UKJ1 303 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 UTS2RQ9UKP6 389 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 ST3GAL5Q9UNP4 418 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 RNF6Q9Y252 685 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 POLDIP2Q9Y2S7 368 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 ETV7Q9Y603 341 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 PCF11O94913 1555 aaKnown RBP3.78□□□□□ -1.8
USP44-208ENST00000552440 PNPLA6Q8IY17 1366 aa3.78□□□□□ -1.8
USP44-208ENST00000552440 SH3PXD2BA1X283 911 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 CCT8L1PA6NM43 557 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 ARHGEF33A8MVX0 844 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 GOLGA8KD6RF30 607 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 PROB1E7EW31 1015 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 H0YL77 283 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 DVL1O14640 695 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 RAB29O14966 203 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 LDB2O43679 373 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 OR10H3O60404 316 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 TSPAN2O60636 221 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 SH3BGRLO75368 114 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 BRI3O95415 125 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 NSA2O95478 260 aaKnown RBP3.77□□□□□ -1.81
USP44-208ENST00000552440 CST4P01036 141 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 GAPDHP04406 335 aaKnown RBP3.77□□□□□ -1.81
USP44-208ENST00000552440 CD82P27701 267 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 CFHR2P36980 270 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 TMPOP42166 694 aaKnown RBP3.77□□□□□ -1.81
USP44-208ENST00000552440 CDKN2CP42773 168 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 GYG1P46976 350 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 OR3A3P47888 321 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 OR2B6P58173 313 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 KRT81Q14533 505 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 ODF4Q2M2E3 257 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 ALG10Q5BKT4 473 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 ALG10BQ5I7T1 473 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 ZNF691Q5VV52 312 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 TIGD3Q6B0B8 471 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 RBM44Q6ZP01 1051 aaKnown RBP3.77□□□□□ -1.81
USP44-208ENST00000552440 LRRC74BQ6ZQY2 392 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 PTF1AQ7RTS3 328 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 SLC29A4Q7RTT9 530 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 PRUNE1Q86TP1 453 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 CATSPERDQ86XM0 798 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 MMD2Q8IY49 270 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 MB21D2Q8IYB1 491 aaPredicted RBP3.77□□□□□ -1.81
USP44-208ENST00000552440 RBFAQ8N0V3 343 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 ARHGAP18Q8N392 663 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 MARVELD2Q8N4S9 558 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 CLDN19Q8N6F1 224 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 OR1F12Q8NHA8 337 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 OR14A16Q8NHC5 309 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 CCDC107Q8WV48 283 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 NUDCD2Q8WVJ2 157 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 PIH1D2Q8WWB5 315 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 DNAAF4Q8WXU2 420 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 MYLPFQ96A32 169 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 CCDC127Q96BQ5 260 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 SERAC1Q96JX3 654 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 C3orf30Q96M34 536 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 FCRL5Q96RD9 977 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 MCRIP2Q9BUT9 160 aaKnown RBP3.77□□□□□ -1.81
USP44-208ENST00000552440 OR51V1Q9H2C8 321 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 FBXL2Q9UKC9 423 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 PADI3Q9ULW8 664 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 ZNF175Q9Y473 711 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 LRRC42Q9Y546 428 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 TIMM22Q9Y584 194 aa3.77□□□□□ -1.81
USP44-208ENST00000552440 UMODL1Q5DID0 1318 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms