RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 OR9I1Q8NGQ6 314 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 GOT1L1Q8NHS2 421 aaPredicted RBP16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 FAM110BQ8TC76 370 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 CCDC120Q96HB5 630 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 VKORC1Q9BQB6 163 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 PTGES2Q9H7Z7 377 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 UBQLN4Q9NRR5 601 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 EXD2Q9NVH0 621 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 SPRR3Q9UBC9 169 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 TNFRSF10DQ9UBN6 386 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 MEMO1Q9Y316 297 aa16.84■□□□□ 0.29
PRPF40B-216ENST00000552301 RELNP78509 3460 aa16.83■□□□□ 0.29
PRPF40B-216ENST00000552301 NDUFB5O43674 189 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 ANP32DO95626 131 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 OXSR1O95747 527 aaPredicted RBP16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 ANGPTL1O95841 491 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 NGFRP08138 427 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 RNF224P0DH78 156 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 SRD5A2P31213 254 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 SMSP52788 366 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 GAS1P54826 345 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 IRX1P78414 480 aaPredicted RBP16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 SQLEQ14534 574 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 GXYLT1Q4G148 440 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 C6orf10Q5SRN2 563 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 SAXO2Q658L1 398 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 ZNF585AQ6P3V2 769 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 ZNF527Q8NB42 609 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 STON2Q8WXE9 905 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 NEURL3Q96EH8 262 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 ITCHQ96J02 903 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 PHF12Q96QT6 1004 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 INPP5KQ9BT40 448 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 OR2B2Q9GZK3 357 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 HOXD1Q9GZZ0 328 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 OR51I1Q9H343 314 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 DSN1Q9H410 356 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 PNPLA3Q9NST1 481 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 ALKBH4Q9NXW9 302 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 FBXL2Q9UKC9 423 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 TRIM33Q9UPN9 1127 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 SLC6A5Q9Y345 797 aa16.83■□□□□ 0.28
PRPF40B-216ENST00000552301 PTPN13Q12923 2485 aa16.82■□□□□ 0.28
PRPF40B-216ENST00000552301 A0A0G2JND7 137 aa16.82■□□□□ 0.28
PRPF40B-216ENST00000552301 ALG1L2C9J202 215 aa16.82■□□□□ 0.28
PRPF40B-216ENST00000552301 WDR1O75083 606 aa16.82■□□□□ 0.28
PRPF40B-216ENST00000552301 VIMP08670 466 aaKnown RBP16.82■□□□□ 0.28
PRPF40B-216ENST00000552301 ENDOUP21128 410 aaKnown RBP16.82■□□□□ 0.28
PRPF40B-216ENST00000552301 TBXA2RP21731 343 aa16.82■□□□□ 0.28
PRPF40B-216ENST00000552301 DPP4P27487 766 aa16.82■□□□□ 0.28
PRPF40B-216ENST00000552301 MRPL19P49406 292 aaKnown RBP16.82■□□□□ 0.28
PRPF40B-216ENST00000552301 HPCAP84074 193 aa16.82■□□□□ 0.28
PRPF40B-216ENST00000552301 C17orf67Q0P5P2 114 aa16.82■□□□□ 0.28
PRPF40B-216ENST00000552301 TMEM211Q6ICI0 200 aa16.82■□□□□ 0.28
PRPF40B-216ENST00000552301 TNFAIP8L2Q6P589 184 aaPredicted RBP16.82■□□□□ 0.28
PRPF40B-216ENST00000552301 ZAR1Q86SH2 424 aa16.82■□□□□ 0.28
PRPF40B-216ENST00000552301 IFNEQ86WN2 208 aa16.82■□□□□ 0.28
PRPF40B-216ENST00000552301 MIPOL1Q8TD10 442 aa16.82■□□□□ 0.28
PRPF40B-216ENST00000552301 PHF10Q8WUB8 498 aaKnown RBP16.82■□□□□ 0.28
PRPF40B-216ENST00000552301 SERHL2Q9H4I8 314 aa16.82■□□□□ 0.28
PRPF40B-216ENST00000552301 RABEP2Q9H5N1 569 aa16.82■□□□□ 0.28
PRPF40B-216ENST00000552301 TAS2R10Q9NYW0 307 aa16.82■□□□□ 0.28
PRPF40B-216ENST00000552301 HRH3Q9Y5N1 445 aa16.82■□□□□ 0.28
PRPF40B-216ENST00000552301 DOPEY1Q5JWR5 2465 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 PCNX1Q96RV3 2341 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 A1L4Q6 167 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 WIPF3A6NGB9 483 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 H3BNH8 94 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 NR5A2O00482 541 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 KRT75O95678 551 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 GSNP06396 782 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 OR12D1P0DN82 309 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 GABRA1P14867 456 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 NCF2P19878 526 aaPredicted RBP16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 TCEA1P23193 301 aaKnown RBP16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 ACVR2AP27037 513 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 DCTP40126 519 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 CDKN2CP42773 168 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 ATP4BP51164 291 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 CASP9P55211 416 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 DSCR4P56555 118 aaPredicted RBP16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 TXNL4AP83876 142 aaKnown RBP16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 GUCY1A3Q02108 690 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 GANABQ14697 944 aaKnown RBP16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 FLYWCH1Q4VC44 716 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 MISPQ8IVT2 679 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 ZNF614Q8N883 585 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 GATSQ8NAP1 163 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 OR2M3Q8NG83 312 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 OR4C3Q8NH37 302 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 RFWD2Q8NHY2 731 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 DUSP19Q8WTR2 217 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 XAGE5Q8WWM1 108 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 VPS33AQ96AX1 596 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 SFXN2Q96NB2 322 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 FBXO34Q9NWN3 711 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 MED11Q9P086 117 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 KCNE3Q9Y6H6 103 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 ICE1Q9Y2F5 2266 aa16.81■□□□□ 0.28
PRPF40B-216ENST00000552301 NPIPA5A0A0B4J1W7 369 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms