RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 LRRC46Q96FV0 321 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 MARK4Q96L34 752 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 DACH2Q96NX9 599 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 PELOQ9BRX2 385 aaKnown RBP6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 SFXN3Q9BWM7 321 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 ELOVL6Q9H5J4 265 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 GRPEL1Q9HAV7 217 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 TNFRSF12AQ9NP84 129 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 EQTNQ9NQ60 294 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 TPSG1Q9NRR2 321 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 BEX4Q9NWD9 120 aaPredicted RBP6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 PACSIN3Q9UKS6 424 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 PCDHGB3Q9Y5G1 929 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 PTGDR2Q9Y5Y4 395 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 CADP27708 2225 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 GNG14A0A1W2PPG7 69 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 OR2M5A3KFT3 312 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 TRIM49D1C9J1S8 452 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 C9JVG2 144 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 EIF3HO15372 352 aaKnown RBP eCLIP6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 KLF4O43474 513 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 CNOT4O95628 575 aaKnown RBP6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 IL18BPO95998 194 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 CGAP01215 116 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 ATP1B1P05026 303 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 PEPDP12955 493 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 POU2F1P14859 743 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 CSNK2A2P19784 350 aaPredicted RBP6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 DRD5P21918 477 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 SHC1P29353 583 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 IL12BP29460 328 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 STX2P32856 288 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 GALNSP34059 522 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 CD79BP40259 229 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 PPICP45877 212 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 PTH2RP49190 550 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 TMED10P49755 219 aaKnown RBP6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 SERPINB8P50452 374 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 FOXA1P55317 472 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 SORDQ00796 357 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 TNK1Q13470 666 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 GAB1Q13480 694 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 CAPRIN1Q14444 709 aaKnown RBP6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 ACKR1Q16570 336 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 UNC50Q53HI1 259 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 ENPP6Q6UWR7 440 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 BEND4Q6ZU67 534 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 DND1Q8IYX4 353 aaKnown RBP6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 OR2M3Q8NG83 312 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 OR7G1Q8NGA0 311 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 RHEBL1Q8TAI7 183 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 ZNF483Q8TF39 744 aaPredicted RBP6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 C16orf78Q8WTQ4 265 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 PIK3R3Q92569 461 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 ZNF524Q96C55 264 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 MTBPQ96DY7 904 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 DNAJA3Q96EY1 480 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 VSTM2LQ96N03 204 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 TM9SF2Q99805 663 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 ACPTQ9BZG2 426 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 ZDHHC18Q9NUE0 388 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 FBXO34Q9NWN3 711 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 TMEM216Q9P0N5 145 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 PPP4R1LQ9P1A2 415 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 ADGRE2Q9UHX3 823 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 ADAM30Q9UKF2 790 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 VDAC3Q9Y277 283 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 TSC22D4Q9Y3Q8 395 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 OR10H1Q9Y4A9 318 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 SVEP1Q4LDE5 3571 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 ABCA1O95477 2261 aa6.14□□□□□ -1.43
PRPF40B-214ENST00000551320 NPIPA5A0A0B4J1W7 369 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 C1orf226A1L170 272 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 FRG2CA6NGY1 282 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 GOLGA6L10A6NI86 522 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 NPIPA7E9PJI5 369 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 UBFD1O14562 309 aaKnown RBP6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 PCDH7O60245 1069 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 FADS1O60427 444 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 DLX3O60479 287 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 DNAJA2O60884 412 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 SMIM24O75264 130 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 SUPT7LO94864 414 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 SEMA3DO95025 777 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 PROCP04070 461 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 RPS17P08708 135 aaKnown RBP6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 NPIPA8P0DM63 369 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 CRYGSP22914 178 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 EDNRAP25101 427 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 SRD5A2P31213 254 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 EVI2BP34910 448 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 HSD17B3P37058 310 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 CDKN1AP38936 164 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 DIO3P55073 304 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 ZNF844Q08AG5 666 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 FAPQ12884 760 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 BIKQ13323 160 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 NDUFAF6Q330K2 333 aa6.13□□□□□ -1.43
PRPF40B-214ENST00000551320 GRAMD1BQ3KR37 738 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms