RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 LYARQ9NX58 379 aaKnown RBP11.72□□□□□ -0.53
SNRPF-203ENST00000551316 MS4A12Q9NXJ0 267 aa11.72□□□□□ -0.53
SNRPF-203ENST00000551316 GPR55Q9Y2T6 319 aaPredicted RBP11.72□□□□□ -0.53
SNRPF-203ENST00000551316 POM121CA8CG34 1229 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 ADAMDEC1O15204 470 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 PNPP00491 289 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 FSHBP01225 129 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 PCNAP12004 261 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 CPMP14384 443 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 GGT1P19440 569 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 PSMA4P25789 261 aaKnown RBP11.71□□□□□ -0.53
SNRPF-203ENST00000551316 STIP1P31948 543 aaKnown RBP11.71□□□□□ -0.53
SNRPF-203ENST00000551316 BSGP35613 385 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 CASP2P42575 452 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 UBASH3AP57075 661 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 IL13RA1P78552 427 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 DDX39BQ13838 428 aaKnown RBP11.71□□□□□ -0.53
SNRPF-203ENST00000551316 SLMAPQ14BN4 828 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 MORF4L2Q15014 288 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 TMEM35AQ53FP2 167 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 TMEM201Q5SNT2 666 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 OR52E8Q6IFG1 317 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 LARP4Q71RC2 724 aaKnown RBP eCLIP11.71□□□□□ -0.532e-7■■□□□ 11.8
SNRPF-203ENST00000551316 BPIFB2Q8N4F0 458 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 SPATA6LQ8N4H0 392 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 ZNF433Q8N7K0 673 aaPredicted RBP11.71□□□□□ -0.53
SNRPF-203ENST00000551316 C2CD4AQ8NCU7 369 aaPredicted RBP11.71□□□□□ -0.53
SNRPF-203ENST00000551316 SRFBP1Q8NEF9 429 aaKnown RBP11.71□□□□□ -0.53
SNRPF-203ENST00000551316 C7orf57Q8NEG2 295 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 SERPINB12Q96P63 405 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 GBP4Q96PP9 640 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 PITHD1Q9GZP4 211 aaPredicted RBP11.71□□□□□ -0.53
SNRPF-203ENST00000551316 GRIP1Q9Y3R0 1128 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 CORINQ9Y5Q5 1042 aa11.71□□□□□ -0.53
SNRPF-203ENST00000551316 RYR1P21817 5038 aa11.71□□□□□ -0.54
SNRPF-203ENST00000551316 PLXNB1O43157 2135 aa11.71□□□□□ -0.54
SNRPF-203ENST00000551316 IGHV3-15A0A0B4J1V0 119 aa11.7□□□□□ -0.54
SNRPF-203ENST00000551316 C9JVG2 144 aa11.7□□□□□ -0.54
SNRPF-203ENST00000551316 FADS1O60427 444 aa11.7□□□□□ -0.54
SNRPF-203ENST00000551316 SNUPNO95149 360 aaKnown RBP11.7□□□□□ -0.54
SNRPF-203ENST00000551316 PTMAP06454 111 aaKnown RBP11.7□□□□□ -0.54
SNRPF-203ENST00000551316 FAM58BPP0C7Q3 252 aa11.7□□□□□ -0.54
SNRPF-203ENST00000551316 PCSK2P16519 638 aa11.7□□□□□ -0.54
SNRPF-203ENST00000551316 DRD5P21918 477 aa11.7□□□□□ -0.54
SNRPF-203ENST00000551316 PRTN3P24158 256 aa11.7□□□□□ -0.54
SNRPF-203ENST00000551316 TLX1P31314 330 aaPredicted RBP11.7□□□□□ -0.54
SNRPF-203ENST00000551316 PPICP45877 212 aa11.7□□□□□ -0.54
SNRPF-203ENST00000551316 OR3A2P47893 321 aa11.7□□□□□ -0.54
SNRPF-203ENST00000551316 HSPA7P48741 367 aa11.7□□□□□ -0.54
SNRPF-203ENST00000551316 SNRPD2P62316 118 aaKnown RBP11.7□□□□□ -0.54
SNRPF-203ENST00000551316 PDAP1Q13442 181 aaKnown RBP11.7□□□□□ -0.54
SNRPF-203ENST00000551316 TSNQ15631 228 aaKnown RBP11.7□□□□□ -0.54
SNRPF-203ENST00000551316 HBMQ6B0K9 141 aa11.7□□□□□ -0.54
SNRPF-203ENST00000551316 EXOC3L1Q86VI1 746 aa11.7□□□□□ -0.54
SNRPF-203ENST00000551316 LRRC57Q8N9N7 239 aa11.7□□□□□ -0.54
SNRPF-203ENST00000551316 DVL3Q92997 716 aaPredicted RBP11.7□□□□□ -0.54
SNRPF-203ENST00000551316 ZNF775Q96BV0 537 aaPredicted RBP11.7□□□□□ -0.54
SNRPF-203ENST00000551316 IQCDQ96DY2 449 aa11.7□□□□□ -0.54
SNRPF-203ENST00000551316 RBM4BQ9BQ04 359 aaKnown RBP11.7□□□□□ -0.54
SNRPF-203ENST00000551316 GPRC5BQ9NZH0 403 aa11.7□□□□□ -0.54
SNRPF-203ENST00000551316 OARD1Q9Y530 152 aa11.7□□□□□ -0.54
SNRPF-203ENST00000551316 IGHV3-9P01782 118 aa11.69□□□□□ -0.54
SNRPF-203ENST00000551316 CCDC175P0C221 793 aa11.69□□□□□ -0.54
SNRPF-203ENST00000551316 BMP4P12644 408 aa11.69□□□□□ -0.54
SNRPF-203ENST00000551316 IFNGR1P15260 489 aa11.69□□□□□ -0.54
SNRPF-203ENST00000551316 PIK3R1P27986 724 aa11.69□□□□□ -0.54
SNRPF-203ENST00000551316 MAGEA1P43355 309 aa11.69□□□□□ -0.54
SNRPF-203ENST00000551316 XKP51811 444 aa11.69□□□□□ -0.54
SNRPF-203ENST00000551316 CDKL1Q00532 357 aa11.69□□□□□ -0.54
SNRPF-203ENST00000551316 CHIT1Q13231 466 aa11.69□□□□□ -0.54
SNRPF-203ENST00000551316 MARCH3Q86UD3 253 aa11.69□□□□□ -0.54
SNRPF-203ENST00000551316 LAS2Q8IYD9 372 aa11.69□□□□□ -0.54
SNRPF-203ENST00000551316 CCDC89Q8N998 374 aa11.69□□□□□ -0.54
SNRPF-203ENST00000551316 ANKRD7Q92527 254 aa11.69□□□□□ -0.54
SNRPF-203ENST00000551316 DTNBP1Q96EV8 351 aa11.69□□□□□ -0.54
SNRPF-203ENST00000551316 ZNF48Q96MX3 618 aaPredicted RBP11.69□□□□□ -0.54
SNRPF-203ENST00000551316 ZNF300Q96RE9 604 aaPredicted RBP11.69□□□□□ -0.54
SNRPF-203ENST00000551316 CITED1Q99966 193 aa11.69□□□□□ -0.54
SNRPF-203ENST00000551316 EFCAB11Q9BUY7 163 aa11.69□□□□□ -0.54
SNRPF-203ENST00000551316 TREM2Q9NZC2 230 aa11.69□□□□□ -0.54
SNRPF-203ENST00000551316 IFNKQ9P0W0 207 aa11.69□□□□□ -0.54
SNRPF-203ENST00000551316 PRSS23O95084 383 aa11.68□□□□□ -0.54
SNRPF-203ENST00000551316 BCL10O95999 233 aa11.68□□□□□ -0.54
SNRPF-203ENST00000551316 AHSGP02765 367 aa11.68□□□□□ -0.54
SNRPF-203ENST00000551316 ZNF37AP17032 561 aaPredicted RBP11.68□□□□□ -0.54
SNRPF-203ENST00000551316 IL12BP29460 328 aa11.68□□□□□ -0.54
SNRPF-203ENST00000551316 RAP1GDS1P52306 607 aa11.68□□□□□ -0.54
SNRPF-203ENST00000551316 GPX6P59796 221 aa11.68□□□□□ -0.54
SNRPF-203ENST00000551316 E2F2Q14209 437 aa11.68□□□□□ -0.54
SNRPF-203ENST00000551316 ASPHD2Q6ICH7 369 aa11.68□□□□□ -0.54
SNRPF-203ENST00000551316 APOOLQ6UXV4 268 aa11.68□□□□□ -0.54
SNRPF-203ENST00000551316 SPATA19Q7Z5L4 167 aa11.68□□□□□ -0.54
SNRPF-203ENST00000551316 TBC1D1Q86TI0 1168 aaPredicted RBP11.68□□□□□ -0.54
SNRPF-203ENST00000551316 RNF10Q8N5U6 811 aaKnown RBP11.68□□□□□ -0.54
SNRPF-203ENST00000551316 OR7G3Q8NG95 312 aa11.68□□□□□ -0.54
SNRPF-203ENST00000551316 UHMK1Q8TAS1 419 aaKnown RBP11.68□□□□□ -0.54
SNRPF-203ENST00000551316 POC1BQ8TC44 478 aa11.68□□□□□ -0.54
SNRPF-203ENST00000551316 FAM110BQ8TC76 370 aa11.68□□□□□ -0.54
SNRPF-203ENST00000551316 DUSP19Q8WTR2 217 aa11.68□□□□□ -0.54
SNRPF-203ENST00000551316 ANKRD49Q8WVL7 239 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms