RNA–Protein interactions for RNA: ENST00000550962.5

CEP290-205, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-205ENST00000550962 TBXA2RP21731 343 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 MSX1P28360 303 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 S100A3P33764 101 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 TIMP3P35625 211 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 PEX19P40855 299 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 ANXA11P50995 505 aaKnown RBP12.11□□□□□ -0.47
CEP290-205ENST00000550962 EEFSECP57772 596 aaKnown RBP12.11□□□□□ -0.47
CEP290-205ENST00000550962 DUSP5Q16690 384 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 GRAMD1BQ3KR37 738 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 GLYR1Q49A26 553 aaPredicted RBP12.11□□□□□ -0.47
CEP290-205ENST00000550962 RAET1LQ5VY80 246 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 NXNQ6DKJ4 435 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 OR5M10Q6IEU7 315 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 OR4F3Q6IEY1 312 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 GDF7Q7Z4P5 450 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 FADS6Q8N9I5 356 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 GLB1L3Q8NCI6 653 aaPredicted RBP12.11□□□□□ -0.47
CEP290-205ENST00000550962 OR4A15Q8NGL6 344 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 PIWIL2Q8TC59 973 aaKnown RBP12.11□□□□□ -0.47
CEP290-205ENST00000550962 ZPLD1Q8TCW7 415 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 LRRC8CQ8TDW0 803 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 PIGQQ9BRB3 760 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 YIPF4Q9BSR8 244 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 DSN1Q9H410 356 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 CXorf36Q9H7Y0 433 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 CALHM2Q9HA72 323 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 EXD2Q9NVH0 621 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 MARCOQ9UEW3 520 aaPredicted RBP12.11□□□□□ -0.47
CEP290-205ENST00000550962 FBXL2Q9UKC9 423 aa12.11□□□□□ -0.47
CEP290-205ENST00000550962 A0A087WZY1 265 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 RNF103-CHMP3A0A140T963 221 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 A0A1W2PQD3 144 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 CD8B2A6NJW9 211 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 ALG1L2C9J202 215 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 OXSR1O95747 527 aaPredicted RBP12.1□□□□□ -0.47
CEP290-205ENST00000550962 PEPDP12955 493 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 HK1P19367 917 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 GAS1P54826 345 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 EEF1A1P68104 462 aaKnown RBP12.1□□□□□ -0.47
CEP290-205ENST00000550962 HBA1P69905 142 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 OCRLQ01968 901 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 BCL2A1Q16548 175 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 ATAD3BQ5T9A4 648 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 EEF1A1P5Q5VTE0 462 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 NSUN5P2Q63ZY6 315 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 RTL6Q6ICC9 239 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 FIGNL1Q6PIW4 674 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 MTERF4Q7Z6M4 381 aaKnown RBP12.1□□□□□ -0.47
CEP290-205ENST00000550962 MARCH3Q86UD3 253 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 CCDC71Q8IV32 467 aaPredicted RBP12.1□□□□□ -0.47
CEP290-205ENST00000550962 WDR75Q8IWA0 830 aaKnown RBP12.1□□□□□ -0.47
CEP290-205ENST00000550962 RPRMLQ8N4K4 120 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 MEIOBQ8N635 442 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 OR2M3Q8NG83 312 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 FAM110BQ8TC76 370 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 DUSP19Q8WTR2 217 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 WDYHV1Q96HA8 205 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 SLC35G5Q96KT7 338 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 ZFP3Q96NJ6 502 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 TRIB1Q96RU8 372 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 TM9SF2Q99805 663 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 SPOCK3Q9BQ16 436 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 AIG1Q9NVV5 245 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 NCOA6Q14686 2063 aaPredicted RBP12.1□□□□□ -0.47
CEP290-205ENST00000550962 NINQ8N4C6 2090 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 ZNF407Q9C0G0 2248 aa12.1□□□□□ -0.47
CEP290-205ENST00000550962 IGLV3-32A0A0A0MS00 114 aa12.09□□□□□ -0.47
CEP290-205ENST00000550962 A0A0G2JNJ9 132 aa12.09□□□□□ -0.47
CEP290-205ENST00000550962 SDHDO14521 159 aa12.09□□□□□ -0.47
CEP290-205ENST00000550962 POU3F2P20265 443 aaPredicted RBP12.09□□□□□ -0.47
CEP290-205ENST00000550962 UQCRC2P22695 453 aa12.09□□□□□ -0.47
CEP290-205ENST00000550962 GRNP28799 593 aaKnown RBP12.09□□□□□ -0.47
CEP290-205ENST00000550962 EPHA3P29320 983 aa12.09□□□□□ -0.47
CEP290-205ENST00000550962 CHI3L1P36222 383 aaPredicted RBP12.09□□□□□ -0.47
CEP290-205ENST00000550962 ZNF41P51814 821 aaPredicted RBP12.09□□□□□ -0.47
CEP290-205ENST00000550962 GFRA1P56159 465 aa12.09□□□□□ -0.47
CEP290-205ENST00000550962 RPS3AP61247 264 aaKnown RBP12.09□□□□□ -0.47
CEP290-205ENST00000550962 TXNL4AP83876 142 aaKnown RBP12.09□□□□□ -0.47
CEP290-205ENST00000550962 GSTA3Q16772 222 aa12.09□□□□□ -0.47
CEP290-205ENST00000550962 DCST2Q5T1A1 773 aa12.09□□□□□ -0.47
CEP290-205ENST00000550962 OR5AK3PQ8NH89 298 aa12.09□□□□□ -0.47
CEP290-205ENST00000550962 ACTRT2Q8TDY3 377 aa12.09□□□□□ -0.47
CEP290-205ENST00000550962 ZNF75CPQ92670 426 aaPredicted RBP12.09□□□□□ -0.47
CEP290-205ENST00000550962 CDS1Q92903 461 aa12.09□□□□□ -0.47
CEP290-205ENST00000550962 C1GALT1C1Q96EU7 318 aa12.09□□□□□ -0.47
CEP290-205ENST00000550962 C16orf58Q96GQ5 468 aa12.09□□□□□ -0.47
CEP290-205ENST00000550962 GPATCH2Q9NW75 528 aa12.09□□□□□ -0.47
CEP290-205ENST00000550962 MED11Q9P086 117 aa12.09□□□□□ -0.47
CEP290-205ENST00000550962 ZNF629Q9UEG4 869 aaPredicted RBP12.09□□□□□ -0.47
CEP290-205ENST00000550962 Q9UFV3 132 aa12.09□□□□□ -0.47
CEP290-205ENST00000550962 RPH3AQ9Y2J0 694 aaPredicted RBP12.09□□□□□ -0.47
CEP290-205ENST00000550962 DNAJC13O75165 2243 aa12.09□□□□□ -0.47
CEP290-205ENST00000550962 GOLGA8QA0A0J9YX86 632 aa12.08□□□□□ -0.48
CEP290-205ENST00000550962 GOLGA8OA6NCC3 632 aa12.08□□□□□ -0.48
CEP290-205ENST00000550962 MBD3L4A6NDZ8 208 aaPredicted RBP12.08□□□□□ -0.48
CEP290-205ENST00000550962 MBD3L3A6NE82 208 aaPredicted RBP12.08□□□□□ -0.48
CEP290-205ENST00000550962 MBD3L5A6NJ08 208 aaPredicted RBP12.08□□□□□ -0.48
CEP290-205ENST00000550962 GOLGA8NF8WBI6 632 aa12.08□□□□□ -0.48
CEP290-205ENST00000550962 CPSF4O95639 269 aaKnown RBP12.08□□□□□ -0.48
CEP290-205ENST00000550962 IGKV1D-16P01601 117 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms