RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 GTF2IRD2BQ6EKJ0 949 aa20.75■□□□□ 0.91
SMARCD1-209ENST00000550477 ZNF550Q7Z398 422 aa20.75■□□□□ 0.91
SMARCD1-209ENST00000550477 GTF2IRD2Q86UP8 949 aa20.75■□□□□ 0.91
SMARCD1-209ENST00000550477 STK32CQ86UX6 486 aa20.75■□□□□ 0.91
SMARCD1-209ENST00000550477 WDR75Q8IWA0 830 aaKnown RBP20.75■□□□□ 0.91
SMARCD1-209ENST00000550477 OR5M1Q8NGP8 315 aa20.75■□□□□ 0.91
SMARCD1-209ENST00000550477 CEP70Q8NHQ1 597 aa20.75■□□□□ 0.91
SMARCD1-209ENST00000550477 METTL2AQ96IZ6 378 aaKnown RBP20.75■□□□□ 0.91
SMARCD1-209ENST00000550477 AMDHD1Q96NU7 426 aa20.75■□□□□ 0.91
SMARCD1-209ENST00000550477 KCNA7Q96RP8 456 aa20.75■□□□□ 0.91
SMARCD1-209ENST00000550477 LMF2Q9BU23 707 aaKnown RBP20.75■□□□□ 0.91
SMARCD1-209ENST00000550477 GLRX2Q9NS18 164 aa20.75■□□□□ 0.91
SMARCD1-209ENST00000550477 A0A087WZY1 265 aa20.74■□□□□ 0.91
SMARCD1-209ENST00000550477 H0YC42 278 aa20.74■□□□□ 0.91
SMARCD1-209ENST00000550477 EIF1AYO14602 144 aaKnown RBP20.74■□□□□ 0.91
SMARCD1-209ENST00000550477 SIAH2O43255 324 aa20.74■□□□□ 0.91
SMARCD1-209ENST00000550477 MYL2P10916 166 aa20.74■□□□□ 0.91
SMARCD1-209ENST00000550477 PRPS2P11908 318 aa20.74■□□□□ 0.91
SMARCD1-209ENST00000550477 NR1H2P55055 460 aa20.74■□□□□ 0.91
SMARCD1-209ENST00000550477 TPD52P55327 224 aaPredicted RBP20.74■□□□□ 0.91
SMARCD1-209ENST00000550477 EXOC3L2Q2M3D2 409 aa20.74■□□□□ 0.91
SMARCD1-209ENST00000550477 CFAP157Q5JU67 520 aa20.74■□□□□ 0.91
SMARCD1-209ENST00000550477 PDSS1Q5T2R2 415 aa20.74■□□□□ 0.91
SMARCD1-209ENST00000550477 FAM219BQ5XKK7 198 aa20.74■□□□□ 0.91
SMARCD1-209ENST00000550477 OR6K3Q8NGY3 331 aa20.74■□□□□ 0.91
SMARCD1-209ENST00000550477 ZFP28Q8NHY6 868 aa20.74■□□□□ 0.91
SMARCD1-209ENST00000550477 GPR151Q8TDV0 419 aa20.74■□□□□ 0.91
SMARCD1-209ENST00000550477 GMPPAQ96IJ6 420 aaPredicted RBP20.74■□□□□ 0.91
SMARCD1-209ENST00000550477 PLSCR4Q9NRQ2 329 aa20.74■□□□□ 0.91
SMARCD1-209ENST00000550477 POLR3HQ9Y535 204 aaPredicted RBP20.74■□□□□ 0.91
SMARCD1-209ENST00000550477 PCNX3Q9H6A9 2034 aa20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 IGLV3-32A0A0A0MS00 114 aa20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 C17orf51A8MQB3 221 aa20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 B4DXG7 233 aa20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 GOLGA8RI6L899 631 aa20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 SMAD7O15105 426 aaKnown RBP20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 NDUFB5O43674 189 aa20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 TMCC2O75069 709 aa20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 RSL1D1O76021 490 aaKnown RBP20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 PSMG1O95456 288 aa20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 SYNGR4O95473 234 aa20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 HPGDP15428 266 aa20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 ANKRD34AQ69YU3 496 aa20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 BEND4Q6ZU67 534 aa20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 TRIM46Q7Z4K8 759 aa20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 HOMEZQ8IX15 550 aa20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 TMEM171Q8WVE6 324 aa20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 C16orf45Q96MC5 204 aaPredicted RBP20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 GSX2Q9BZM3 304 aa20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 GSTO2Q9H4Y5 243 aa20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 CXorf56Q9H5V9 222 aa20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 FLRT3Q9NZU0 649 aa20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 VDAC3Q9Y277 283 aa20.73■□□□□ 0.91
SMARCD1-209ENST00000550477 ZNF17P17021 662 aa20.72■□□□□ 0.91
SMARCD1-209ENST00000550477 ME2P23368 584 aa20.72■□□□□ 0.91
SMARCD1-209ENST00000550477 ECHS1P30084 290 aa20.72■□□□□ 0.91
SMARCD1-209ENST00000550477 NOXRED1Q6NXP6 359 aa20.72■□□□□ 0.91
SMARCD1-209ENST00000550477 NOA1Q8NC60 698 aaKnown RBP20.72■□□□□ 0.91
SMARCD1-209ENST00000550477 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.72■□□□□ 0.91
SMARCD1-209ENST00000550477 PSMC3IPQ9P2W1 217 aaPredicted RBP20.72■□□□□ 0.91
SMARCD1-209ENST00000550477 HEATR5AQ86XA9 2040 aa20.71■□□□□ 0.91
SMARCD1-209ENST00000550477 GMFGO60234 142 aa20.71■□□□□ 0.91
SMARCD1-209ENST00000550477 SEC22BO75396 215 aa20.71■□□□□ 0.91
SMARCD1-209ENST00000550477 AQP8O94778 261 aa20.71■□□□□ 0.91
SMARCD1-209ENST00000550477 PYGBP11216 843 aa20.71■□□□□ 0.91
SMARCD1-209ENST00000550477 DDX5P17844 614 aaKnown RBP20.71■□□□□ 0.91
SMARCD1-209ENST00000550477 IL11P20809 199 aa20.71■□□□□ 0.91
SMARCD1-209ENST00000550477 CCKARP32238 428 aa20.71■□□□□ 0.91
SMARCD1-209ENST00000550477 ZNF41P51814 821 aaPredicted RBP20.71■□□□□ 0.91
SMARCD1-209ENST00000550477 CDRT4Q8N9R6 151 aa20.71■□□□□ 0.91
SMARCD1-209ENST00000550477 ZBTB8AQ96BR9 441 aa20.71■□□□□ 0.91
SMARCD1-209ENST00000550477 RTN4RQ9BZR6 473 aa20.71■□□□□ 0.91
SMARCD1-209ENST00000550477 EQTNQ9NQ60 294 aa20.71■□□□□ 0.91
SMARCD1-209ENST00000550477 SLC28A1O00337 649 aa20.7■□□□□ 0.9
SMARCD1-209ENST00000550477 PDPK1O15530 556 aa20.7■□□□□ 0.9
SMARCD1-209ENST00000550477 GLRA3O75311 464 aa20.7■□□□□ 0.9
SMARCD1-209ENST00000550477 PABPC4LP0CB38 370 aaKnown RBP20.7■□□□□ 0.9
SMARCD1-209ENST00000550477 GCAP28676 217 aa20.7■□□□□ 0.9
SMARCD1-209ENST00000550477 PRKAG1P54619 331 aa20.7■□□□□ 0.9
SMARCD1-209ENST00000550477 FOXA1P55317 472 aa20.7■□□□□ 0.9
SMARCD1-209ENST00000550477 RAC1P63000 192 aa20.7■□□□□ 0.9
SMARCD1-209ENST00000550477 HSPB3Q12988 150 aa20.7■□□□□ 0.9
SMARCD1-209ENST00000550477 SLC29A2Q14542 456 aa20.7■□□□□ 0.9
SMARCD1-209ENST00000550477 GUSBP1Q15486 140 aa20.7■□□□□ 0.9
SMARCD1-209ENST00000550477 GRAMD1BQ3KR37 738 aa20.7■□□□□ 0.9
SMARCD1-209ENST00000550477 MISPQ8IVT2 679 aa20.7■□□□□ 0.9
SMARCD1-209ENST00000550477 IFT20Q8IY31 132 aa20.7■□□□□ 0.9
SMARCD1-209ENST00000550477 OR10D3Q8NH80 312 aa20.7■□□□□ 0.9
SMARCD1-209ENST00000550477 ZBED6CLQ96FA7 236 aaPredicted RBP20.7■□□□□ 0.9
SMARCD1-209ENST00000550477 REXO5Q96IC2 774 aaKnown RBP20.7■□□□□ 0.9
SMARCD1-209ENST00000550477 OR10A4Q9H209 315 aa20.7■□□□□ 0.9
SMARCD1-209ENST00000550477 ALG1L2C9J202 215 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 RIPK2O43353 540 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 RGS14O43566 566 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 CNOT4O95628 575 aaKnown RBP20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 UROSP10746 265 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 LCN1P31025 176 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 CCT5P48643 541 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 PTH2RP49190 550 aa20.69■□□□□ 0.9
SMARCD1-209ENST00000550477 MANFP55145 182 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms