RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 NDUFAF1Q9Y375 327 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 B4DXG7 233 aa20.54■□□□□ 0.88
BRF1-216ENST00000550208 FCMRO60667 390 aa20.54■□□□□ 0.88
BRF1-216ENST00000550208 ANGPTL1O95841 491 aa20.54■□□□□ 0.88
BRF1-216ENST00000550208 AGR2O95994 175 aa20.54■□□□□ 0.88
BRF1-216ENST00000550208 IGHG3P01860 377 aa20.54■□□□□ 0.88
BRF1-216ENST00000550208 NGFRP08138 427 aa20.54■□□□□ 0.88
BRF1-216ENST00000550208 ELAVL4P26378 380 aaKnown RBP20.54■□□□□ 0.88
BRF1-216ENST00000550208 STX5Q13190 355 aa20.54■□□□□ 0.88
BRF1-216ENST00000550208 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.54■□□□□ 0.88
BRF1-216ENST00000550208 ATAD3BQ5T9A4 648 aa20.54■□□□□ 0.88
BRF1-216ENST00000550208 TRILQ7L0X0 811 aa20.54■□□□□ 0.88
BRF1-216ENST00000550208 C16orf62Q7Z3J2 963 aa20.54■□□□□ 0.88
BRF1-216ENST00000550208 RETREG3Q86VR2 466 aa20.54■□□□□ 0.88
BRF1-216ENST00000550208 MSRB3Q8IXL7 192 aa20.54■□□□□ 0.88
BRF1-216ENST00000550208 TSPEARQ8WU66 669 aa20.54■□□□□ 0.88
BRF1-216ENST00000550208 NMUR2Q9GZQ4 415 aa20.54■□□□□ 0.88
BRF1-216ENST00000550208 PPP4R1LQ9P1A2 415 aa20.54■□□□□ 0.88
BRF1-216ENST00000550208 LEF1Q9UJU2 399 aaPredicted RBP20.54■□□□□ 0.88
BRF1-216ENST00000550208 FBXL2Q9UKC9 423 aa20.54■□□□□ 0.88
BRF1-216ENST00000550208 FREM3P0C091 2139 aa20.54■□□□□ 0.88
BRF1-216ENST00000550208 ALG1L2C9J202 215 aa20.53■□□□□ 0.88
BRF1-216ENST00000550208 CLIC1O00299 241 aa20.53■□□□□ 0.88
BRF1-216ENST00000550208 CBR3O75828 277 aa20.53■□□□□ 0.88
BRF1-216ENST00000550208 AK1P00568 194 aa20.53■□□□□ 0.88
BRF1-216ENST00000550208 RBPJQ06330 500 aa20.53■□□□□ 0.88
BRF1-216ENST00000550208 FUT5Q11128 374 aa20.53■□□□□ 0.88
BRF1-216ENST00000550208 TOMM20Q15388 145 aa20.53■□□□□ 0.88
BRF1-216ENST00000550208 FLYWCH1Q4VC44 716 aa20.53■□□□□ 0.88
BRF1-216ENST00000550208 DLEU7Q6UYE1 221 aa20.53■□□□□ 0.88
BRF1-216ENST00000550208 SPPL2CQ8IUH8 684 aa20.53■□□□□ 0.88
BRF1-216ENST00000550208 ROPN1LQ96C74 230 aa20.53■□□□□ 0.88
BRF1-216ENST00000550208 HOXD1Q9GZZ0 328 aa20.53■□□□□ 0.88
BRF1-216ENST00000550208 NSRP1Q9H0G5 558 aaKnown RBP20.53■□□□□ 0.88
BRF1-216ENST00000550208 SLC6A15Q9H2J7 730 aa20.53■□□□□ 0.88
BRF1-216ENST00000550208 DSN1Q9H410 356 aa20.53■□□□□ 0.88
BRF1-216ENST00000550208 LDAHQ9H6V9 325 aa20.53■□□□□ 0.88
BRF1-216ENST00000550208 ACKR4Q9NPB9 350 aa20.53■□□□□ 0.88
BRF1-216ENST00000550208 MED11Q9P086 117 aa20.53■□□□□ 0.88
BRF1-216ENST00000550208 VAPAQ9P0L0 249 aa20.53■□□□□ 0.88
BRF1-216ENST00000550208 MKLN1Q9UL63 735 aa20.53■□□□□ 0.88
BRF1-216ENST00000550208 ZNF835Q9Y2P0 537 aa20.53■□□□□ 0.88
BRF1-216ENST00000550208 FASNP49327 2511 aaKnown RBP20.53■□□□□ 0.88
BRF1-216ENST00000550208 ZNF407Q9C0G0 2248 aa20.53■□□□□ 0.88
BRF1-216ENST00000550208 A0A1B0GVC2 190 aa20.52■□□□□ 0.88
BRF1-216ENST00000550208 SNX3O60493 162 aa20.52■□□□□ 0.88
BRF1-216ENST00000550208 STX11O75558 287 aa20.52■□□□□ 0.88
BRF1-216ENST00000550208 ZIC2O95409 532 aaPredicted RBP20.52■□□□□ 0.88
BRF1-216ENST00000550208 HPNP05981 417 aa20.52■□□□□ 0.88
BRF1-216ENST00000550208 ETFAP13804 333 aa20.52■□□□□ 0.88
BRF1-216ENST00000550208 HPGDP15428 266 aa20.52■□□□□ 0.88
BRF1-216ENST00000550208 DCTP40126 519 aa20.52■□□□□ 0.88
BRF1-216ENST00000550208 CRATP43155 626 aa20.52■□□□□ 0.88
BRF1-216ENST00000550208 ANXA11P50995 505 aaKnown RBP20.52■□□□□ 0.88
BRF1-216ENST00000550208 ATP12AP54707 1039 aa20.52■□□□□ 0.88
BRF1-216ENST00000550208 TXNL4AP83876 142 aaKnown RBP20.52■□□□□ 0.88
BRF1-216ENST00000550208 GTF3C1Q12789 2109 aa20.52■□□□□ 0.88
BRF1-216ENST00000550208 GPR68Q15743 365 aa20.52■□□□□ 0.88
BRF1-216ENST00000550208 SYPL1Q16563 259 aa20.52■□□□□ 0.88
BRF1-216ENST00000550208 EIPR1Q53HC9 387 aa20.52■□□□□ 0.88
BRF1-216ENST00000550208 ANKFN1Q8N957 763 aa20.52■□□□□ 0.88
BRF1-216ENST00000550208 GATSQ8NAP1 163 aa20.52■□□□□ 0.88
BRF1-216ENST00000550208 PCNX3Q9H6A9 2034 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 POLEQ07864 2286 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 TRBV5-3A0A0A0MS03 114 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 TRGV5A0A0B4J1U4 118 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 LOC100653049A0A140TA62 436 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 NPIPB9F8W1W9 429 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 FBP2O00757 339 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 SCDO00767 359 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 ANGPT2O15123 496 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 NDUFB5O43674 189 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 KRT34O76011 436 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 PTGS2P35354 604 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 RNF144AP50876 292 aaPredicted RBP20.51■□□□□ 0.87
BRF1-216ENST00000550208 C17orf67Q0P5P2 114 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 GPAT3Q53EU6 434 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 KLHL26Q53HC5 615 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 WIPI1Q5MNZ9 446 aaPredicted RBP20.51■□□□□ 0.87
BRF1-216ENST00000550208 ARHGAP11AQ6P4F7 1023 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 YRDCQ86U90 279 aaKnown RBP20.51■□□□□ 0.87
BRF1-216ENST00000550208 DPP10Q8N608 796 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 FADS6Q8N9I5 356 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 OR2M3Q8NG83 312 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 OR4K17Q8NGC6 315 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 ZNF350Q9GZX5 532 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 EXO5Q9H790 373 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 MRGBPQ9NV56 204 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 ARMCX1Q9P291 453 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 KCNE5Q9UJ90 142 aa20.51■□□□□ 0.87
BRF1-216ENST00000550208 DNAJC13O75165 2243 aa20.5■□□□□ 0.87
BRF1-216ENST00000550208 SUSD5O60279 629 aa20.5■□□□□ 0.87
BRF1-216ENST00000550208 HCN1O60741 890 aa20.5■□□□□ 0.87
BRF1-216ENST00000550208 SLC19A2O60779 497 aa20.5■□□□□ 0.87
BRF1-216ENST00000550208 STSP08842 583 aa20.5■□□□□ 0.87
BRF1-216ENST00000550208 ADSLP30566 484 aaPredicted RBP20.5■□□□□ 0.87
BRF1-216ENST00000550208 MAGEA8P43361 318 aa20.5■□□□□ 0.87
BRF1-216ENST00000550208 CHRNEQ04844 493 aa20.5■□□□□ 0.87
BRF1-216ENST00000550208 SRSF1Q07955 248 aaKnown RBP eCLIP20.5■□□□□ 0.87
BRF1-216ENST00000550208 RGNQ15493 299 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms