RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 RBM28Q9NW13 759 aaKnown RBP3.97□□□□□ -1.77
USP15-213ENST00000549268 IMPAD1Q9NX62 359 aa3.97□□□□□ -1.77
USP15-213ENST00000549268 DHRS7Q9Y394 339 aa3.97□□□□□ -1.77
USP15-213ENST00000549268 KLF2Q9Y5W3 355 aaPredicted RBP3.97□□□□□ -1.77
USP15-213ENST00000549268 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.97□□□□□ -1.77
USP15-213ENST00000549268 NSD2O96028 1365 aa3.97□□□□□ -1.77
USP15-213ENST00000549268 C15orf38-AP3S2A0A0A6YYH1 394 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 XKRY2A2RUG3 117 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 NPIPA2E9PIF3 369 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 K7EQM0 130 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 LCMT2O60294 686 aaKnown RBP3.96□□□□□ -1.78
USP15-213ENST00000549268 SLC35G4P0C7Q5 338 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 PGAM2P15259 253 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 RPA2P15927 270 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 TNNI3P19429 210 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 PTPN6P29350 595 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 DLSTP36957 453 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 ARHGDIBP52566 201 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 ZIC1Q15915 447 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 PDK4Q16654 411 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 KCTD21Q4G0X4 260 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 Q6ZR54 194 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 LINC00612Q8N6U2 182 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 OR13C2Q8NGS9 318 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 MCHR2Q969V1 340 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 NCLNQ969V3 563 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 PPP1R16AQ96I34 528 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 C4orf36Q96KX1 117 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 ZNF607Q96SK3 696 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 SECISBP2Q96T21 854 aaKnown RBP3.96□□□□□ -1.78
USP15-213ENST00000549268 MRPL13Q9BYD1 178 aaKnown RBP3.96□□□□□ -1.78
USP15-213ENST00000549268 VCX2Q9H322 139 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 ATP6V1HQ9UI12 483 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 PURGQ9UJV8 347 aaKnown RBP3.96□□□□□ -1.78
USP15-213ENST00000549268 ZNF490Q9ULM2 529 aaPredicted RBP3.96□□□□□ -1.78
USP15-213ENST00000549268 VSIG4Q9Y279 399 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 MRPS7Q9Y2R9 242 aaKnown RBP3.96□□□□□ -1.78
USP15-213ENST00000549268 RNF115Q9Y4L5 304 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 CUX2O14529 1486 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 AGRNO00468 2067 aa3.96□□□□□ -1.78
USP15-213ENST00000549268 GON4LQ3T8J9 2241 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 CTAGE15A4D2H0 777 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 PDXKO00764 312 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 SURF6O75683 361 aaKnown RBP3.95□□□□□ -1.78
USP15-213ENST00000549268 OR4F21O95013 312 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 MFN2O95140 757 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 IGHV3-9P01782 118 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 HOXB7P09629 217 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 TSPAN8P19075 237 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 IDSP22304 550 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 ATP5OP48047 213 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 PPIAP62937 165 aaKnown RBP3.95□□□□□ -1.78
USP15-213ENST00000549268 TNFRSF17Q02223 184 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 ZNF85Q03923 595 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 DDX39BQ13838 428 aaKnown RBP3.95□□□□□ -1.78
USP15-213ENST00000549268 ZMYND11Q15326 602 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 ZNF699Q32M78 642 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 CFAP221Q4G0U5 840 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 TPGS2Q68CL5 300 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 BAIAP2L2Q6UXY1 529 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 CCDC73Q6ZRK6 1079 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 CTAGE6Q86UF2 777 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 GCNT2Q8N0V5 402 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 TFB1MQ8WVM0 346 aaKnown RBP3.95□□□□□ -1.78
USP15-213ENST00000549268 DNAJA3Q96EY1 480 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 C9orf85Q96MD7 179 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 OR5M11Q96RB7 305 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 ZBTB18Q99592 522 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 CCT7Q99832 543 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 WDR76Q9H967 626 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 CALHM2Q9HA72 323 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 DCAF13Q9NV06 445 aaKnown RBP3.95□□□□□ -1.78
USP15-213ENST00000549268 RDH8Q9NYR8 311 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 GHRLQ9UBU3 117 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 DDX49Q9Y6V7 483 aaKnown RBP3.95□□□□□ -1.78
USP15-213ENST00000549268 HCFC1P51610 2035 aa3.95□□□□□ -1.78
USP15-213ENST00000549268 TMEM110-MUSTN1A8MSY1 372 aa3.94□□□□□ -1.78
USP15-213ENST00000549268 G3V3Y1 287 aa3.94□□□□□ -1.78
USP15-213ENST00000549268 PDLIM1O00151 329 aa3.94□□□□□ -1.78
USP15-213ENST00000549268 RHOBTB1O94844 696 aa3.94□□□□□ -1.78
USP15-213ENST00000549268 WNT2P09544 360 aa3.94□□□□□ -1.78
USP15-213ENST00000549268 GSTT2P0CG29 244 aa3.94□□□□□ -1.78
USP15-213ENST00000549268 GSTT2BP0CG30 244 aa3.94□□□□□ -1.78
USP15-213ENST00000549268 CCNCP24863 283 aa3.94□□□□□ -1.78
USP15-213ENST00000549268 CNTN2Q02246 1040 aa3.94□□□□□ -1.78
USP15-213ENST00000549268 ZNF33BQ06732 778 aa3.94□□□□□ -1.78
USP15-213ENST00000549268 RAB35Q15286 201 aa3.94□□□□□ -1.78
USP15-213ENST00000549268 TRIP10Q15642 601 aa3.94□□□□□ -1.78
USP15-213ENST00000549268 ACSF3Q4G176 576 aaPredicted RBP3.94□□□□□ -1.78
USP15-213ENST00000549268 LRRC70Q7Z2Q7 622 aa3.94□□□□□ -1.78
USP15-213ENST00000549268 VPS36Q86VN1 386 aa3.94□□□□□ -1.78
USP15-213ENST00000549268 GIPC3Q8TF64 312 aa3.94□□□□□ -1.78
USP15-213ENST00000549268 CCT8L2Q96SF2 557 aa3.94□□□□□ -1.78
USP15-213ENST00000549268 STARD5Q9NSY2 213 aa3.94□□□□□ -1.78
USP15-213ENST00000549268 DUS2Q9NX74 493 aaKnown RBP3.94□□□□□ -1.78
USP15-213ENST00000549268 AIPL1Q9NZN9 384 aa3.94□□□□□ -1.78
USP15-213ENST00000549268 KLRF1Q9NZS2 232 aa3.94□□□□□ -1.78
USP15-213ENST00000549268 P2RX2Q9UBL9 471 aa3.94□□□□□ -1.78
USP15-213ENST00000549268 FOXJ3Q9UPW0 622 aa3.94□□□□□ -1.78
USP15-213ENST00000549268 NTNG1Q9Y2I2 539 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms