RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 CRISP3P54108 245 aa19.32■□□□□ 0.68
CACNB3-210ENST00000548874 HPCAP84074 193 aa19.32■□□□□ 0.68
CACNB3-210ENST00000548874 MXRA7P84157 204 aa19.32■□□□□ 0.68
CACNB3-210ENST00000548874 CDK6Q00534 326 aa19.32■□□□□ 0.68
CACNB3-210ENST00000548874 CHRNEQ04844 493 aa19.32■□□□□ 0.68
CACNB3-210ENST00000548874 SNTA1Q13424 505 aa19.32■□□□□ 0.68
CACNB3-210ENST00000548874 FLYWCH1Q4VC44 716 aa19.32■□□□□ 0.68
CACNB3-210ENST00000548874 TBCELQ5QJ74 424 aa19.32■□□□□ 0.68
CACNB3-210ENST00000548874 BICRALQ6AI39 1079 aa19.32■□□□□ 0.68
CACNB3-210ENST00000548874 RINLQ6ZS11 566 aa19.32■□□□□ 0.68
CACNB3-210ENST00000548874 GALNTL5Q7Z4T8 443 aa19.32■□□□□ 0.68
CACNB3-210ENST00000548874 ZNF619Q8N2I2 560 aa19.32■□□□□ 0.68
CACNB3-210ENST00000548874 POGLUT1Q8NBL1 392 aa19.32■□□□□ 0.68
CACNB3-210ENST00000548874 C11orf65Q8NCR3 313 aa19.32■□□□□ 0.68
CACNB3-210ENST00000548874 PMM1Q92871 262 aa19.32■□□□□ 0.68
CACNB3-210ENST00000548874 TREX2Q9BQ50 279 aaPredicted RBP19.32■□□□□ 0.68
CACNB3-210ENST00000548874 HOXD1Q9GZZ0 328 aa19.32■□□□□ 0.68
CACNB3-210ENST00000548874 KLHL1Q9NR64 748 aa19.32■□□□□ 0.68
CACNB3-210ENST00000548874 KCNE5Q9UJ90 142 aa19.32■□□□□ 0.68
CACNB3-210ENST00000548874 PIEZO2Q9H5I5 2752 aa19.32■□□□□ 0.68
CACNB3-210ENST00000548874 NPIPA5A0A0B4J1W7 369 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 A0A0G2JMM0 328 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 A0A1W2PPB8 328 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 A0A1W2PRS3 328 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 KIR3DP1A8MWS1 328 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 FAM220BPB1ANY3 271 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 NPIPA7E9PJI5 369 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 NPIPA8P0DM63 369 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 ATP12AP54707 1039 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 GAS1P54826 345 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 EEFSECP57772 596 aaKnown RBP19.31■□□□□ 0.68
CACNB3-210ENST00000548874 SCARB2Q14108 478 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 GPR68Q15743 365 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 ZNF141Q15928 474 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 PLEKHN1Q494U1 663 aaPredicted RBP19.31■□□□□ 0.68
CACNB3-210ENST00000548874 PRAMEF20Q5VT98 475 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 SLC30A6Q6NXT4 461 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 RPUSD3Q6P087 351 aaKnown RBP19.31■□□□□ 0.68
CACNB3-210ENST00000548874 APOOLQ6UXV4 268 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 SULF2Q8IWU5 870 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 NFKBIDQ8NI38 313 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 OIT3Q8WWZ8 545 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 REXO5Q96IC2 774 aaKnown RBP19.31■□□□□ 0.68
CACNB3-210ENST00000548874 FRMD6Q96NE9 622 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 OSBPL11Q9BXB4 747 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 C1orf21Q9H246 121 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 METTL7AQ9H8H3 244 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 TAS2R1Q9NYW7 299 aa19.31■□□□□ 0.68
CACNB3-210ENST00000548874 A0A0G2JPF8 293 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 CENPVL1A0A0U1RR11 272 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 A0A1W2PQD3 144 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 HNRNPCL2B2RXH8 293 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 HNRNPCL3B7ZW38 293 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 ALG1L2C9J202 215 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 HNRNPCL1O60812 293 aaKnown RBP19.3■□□□□ 0.68
CACNB3-210ENST00000548874 UGT2B17O75795 530 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 PGM3O95394 542 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 HNRNPCL4P0DMR1 293 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 RPS4Y1P22090 263 aaKnown RBP19.3■□□□□ 0.68
CACNB3-210ENST00000548874 PCGF2P35227 344 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 LIPEQ05469 1076 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 KLRB1Q12918 225 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 VMACQ2NL98 169 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 KLHL26Q53HC5 615 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 RPS26P11Q5JNZ5 115 aaPredicted RBP19.3■□□□□ 0.68
CACNB3-210ENST00000548874 REEP3Q6NUK4 255 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 ERICH5Q6P6B1 374 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 DEFB107AQ8IZN7 70 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 Q8NA96 180 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 HIPK4Q8NE63 616 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 BBS10Q8TAM1 723 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 ZG16BQ96DA0 208 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 RTN4RQ9BZR6 473 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 PIF1Q9H611 641 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 MTHFD2LQ9H903 347 aaPredicted RBP19.3■□□□□ 0.68
CACNB3-210ENST00000548874 SUCOQ9UBS9 1254 aaKnown RBP19.3■□□□□ 0.68
CACNB3-210ENST00000548874 USP22Q9UPT9 525 aa19.3■□□□□ 0.68
CACNB3-210ENST00000548874 TLN1Q9Y490 2541 aaKnown RBP19.29■□□□□ 0.68
CACNB3-210ENST00000548874 AGAP5A6NIR3 686 aa19.29■□□□□ 0.68
CACNB3-210ENST00000548874 C5orf58C9J3I9 102 aa19.29■□□□□ 0.68
CACNB3-210ENST00000548874 G3V3Y1 287 aa19.29■□□□□ 0.68
CACNB3-210ENST00000548874 PEX1O43933 1283 aa19.29■□□□□ 0.68
CACNB3-210ENST00000548874 DNAJA2O60884 412 aa19.29■□□□□ 0.68
CACNB3-210ENST00000548874 TRIM3O75382 744 aaPredicted RBP19.29■□□□□ 0.68
CACNB3-210ENST00000548874 SNX4O95219 450 aa19.29■□□□□ 0.68
CACNB3-210ENST00000548874 DNASE1L1P49184 302 aa19.29■□□□□ 0.68
CACNB3-210ENST00000548874 GSK3BP49841 420 aa19.29■□□□□ 0.68
CACNB3-210ENST00000548874 GPR85P60893 370 aa19.29■□□□□ 0.68
CACNB3-210ENST00000548874 FOXO1Q12778 655 aa19.29■□□□□ 0.68
CACNB3-210ENST00000548874 MAPK14Q16539 360 aa19.29■□□□□ 0.68
CACNB3-210ENST00000548874 SLC30A8Q8IWU4 369 aa19.29■□□□□ 0.68
CACNB3-210ENST00000548874 TEX19Q8NA77 164 aa19.29■□□□□ 0.68
CACNB3-210ENST00000548874 OR2T12Q8NG77 320 aa19.29■□□□□ 0.68
CACNB3-210ENST00000548874 OR2M7Q8NG81 312 aa19.29■□□□□ 0.68
CACNB3-210ENST00000548874 SLC7A6OSQ96CW6 309 aaPredicted RBP19.29■□□□□ 0.68
CACNB3-210ENST00000548874 FAM173AQ9BQD7 235 aa19.29■□□□□ 0.68
CACNB3-210ENST00000548874 DOHHQ9BU89 302 aa19.29■□□□□ 0.68
CACNB3-210ENST00000548874 ALG2Q9H553 416 aa19.29■□□□□ 0.68
CACNB3-210ENST00000548874 GALNT9Q9HCQ5 603 aa19.29■□□□□ 0.68
CACNB3-210ENST00000548874 KLRF1Q9NZS2 232 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms