RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 GIMAP5Q96F15 307 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 ZNF845Q96IR2 970 aaPredicted RBP15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 PIGQQ9BRB3 760 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 TBL1XR1Q9BZK7 514 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 RNF122Q9H9V4 155 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 SLC28A1O00337 649 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 AZIN1O14977 448 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 SIAH2O43255 324 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 RGS14O43566 566 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 TNFRSF21O75509 655 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 NKX2-2O95096 273 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 KCNH1O95259 989 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 ANGPTL1O95841 491 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 PRPS2P11908 318 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 CD53P19397 219 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 FRKP42685 505 aaPredicted RBP15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 EEFSECP57772 596 aaKnown RBP15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 RPL38P63173 70 aaKnown RBP15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 SIRPAP78324 504 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 SLC18A2Q05940 514 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 FAM27E3Q08E93 113 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 PON3Q15166 354 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 GUSBP1Q15486 140 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 GLYR1Q49A26 553 aaPredicted RBP15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 METTL25Q8N6Q8 603 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 WFDC11Q8NEX6 87 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 CLHC1Q8NHS4 586 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 FBXO30Q8TB52 745 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 PPCDCQ96CD2 204 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 MS4A4EQ96PG1 132 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 TSSK3Q96PN8 268 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 TRMOQ9BU70 441 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 GATA5Q9BWX5 397 aaPredicted RBP15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 OPN3Q9H1Y3 402 aaPredicted RBP15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 REEP4Q9H6H4 257 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 C3orf14Q9HBI5 128 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 NTMQ9P121 344 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 MID2Q9UJV3 735 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 FIS1Q9Y3D6 152 aa15.66■□□□□ 0.1
CHMP1A-205ENST00000548650 DEFB108AA8MXU0 73 aa15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 SHISA8B8ZZ34 492 aa15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 LSM1O15116 133 aaKnown RBP15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 EMC8O43402 210 aa15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 AKAP10O43572 662 aa15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 CGAP01215 116 aa15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 ACP2P11117 423 aa15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 ZNF17P17021 662 aa15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 GPC1P35052 558 aa15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 CD79BP40259 229 aa15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 CLK3P49761 638 aaKnown RBP15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 C17orf67Q0P5P2 114 aa15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 GALNT10Q86SR1 603 aa15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 GGNQ86UU5 652 aa15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 EXOC3L1Q86VI1 746 aa15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 CDRT4Q8N9R6 151 aa15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 ZFP28Q8NHY6 868 aa15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 GPR151Q8TDV0 419 aa15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 ZBED6CLQ96FA7 236 aaPredicted RBP15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 PGM2Q96G03 612 aa15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 MKS1Q9NXB0 559 aa15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 KLHL28Q9NXS3 571 aa15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 NDRG3Q9UGV2 375 aa15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 DNAJC15Q9Y5T4 150 aa15.65■□□□□ 0.1
CHMP1A-205ENST00000548650 NSD1Q96L73 2696 aaPredicted RBP15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 TMEM233B4DJY2 109 aa15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 ALG1L2C9J202 215 aa15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 CTIFO43310 598 aaKnown RBP15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 GMFGO60234 142 aa15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 OXSR1O95747 527 aaPredicted RBP15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 NGFRP08138 427 aa15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 CD8BP10966 210 aa15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 OCRLQ01968 901 aa15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 VPS26BQ4G0F5 336 aa15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 RFTN2Q52LD8 501 aaPredicted RBP15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 EXOSC6Q5RKV6 272 aaKnown RBP15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 MFSD12Q6NUT3 480 aa15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 ZAR1Q86SH2 424 aa15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 CXorf67Q86X51 503 aaPredicted RBP15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 NUP43Q8NFH3 380 aa15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 APOPT1Q96IL0 206 aa15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 WFIKKN1Q96NZ8 548 aa15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 FAM111AQ96PZ2 611 aa15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 ACSS1Q9NUB1 689 aaPredicted RBP15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 BEX4Q9NWD9 120 aaPredicted RBP15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 C6orf203Q9P0P8 240 aaPredicted RBP15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 BAIAP2L1Q9UHR4 511 aa15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 EIF3LQ9Y262 564 aaKnown RBP15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 TMED5Q9Y3A6 229 aa15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 AP4B1Q9Y6B7 739 aa15.64■□□□□ 0.09
CHMP1A-205ENST00000548650 NIPBLQ6KC79 2804 aaeCLIP15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 CASKO14936 926 aa15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 TRIM13O60858 407 aa15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 AQP8O94778 261 aa15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 CHRNGP07510 517 aa15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 LINC00032P0C843 101 aa15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 FCGR2AP12318 317 aa15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 FOSL1P15407 271 aa15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 HOXC12P31275 282 aa15.63■□□□□ 0.09
CHMP1A-205ENST00000548650 UGT2B10P36537 528 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms