RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 CXXC5Q7LFL8 322 aaKnown RBP13.28□□□□□ -0.28
SRP54-202ENST00000546080 KIAA0907Q7Z7F0 614 aaPredicted RBP13.28□□□□□ -0.28
SRP54-202ENST00000546080 TPRA1Q86W33 373 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 NUDT13Q86X67 352 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 CPOQ8IVL8 374 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 BMPERQ8N8U9 685 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 SLC43A3Q8NBI5 491 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 COQ10AQ96MF6 247 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 TMEM168Q9H0V1 697 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 IL20Q9NYY1 176 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 IL20RAQ9UHF4 553 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 A0A0G2JPF8 293 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 hCG_1807616A0A1W2PRN6 198 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 TUBAL3A6NHL2 446 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 FAM183AA6NL82 134 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 HNRNPCL2B2RXH8 293 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 HNRNPCL3B7ZW38 293 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 ATP6V1G2-DDX39BF2Z307 99 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 ZNF593O00488 134 aaPredicted RBP13.28□□□□□ -0.28
SRP54-202ENST00000546080 KHNYNO15037 678 aaKnown RBP13.28□□□□□ -0.28
SRP54-202ENST00000546080 MT-ND4P03905 459 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 HNRNPCL4P0DMR1 293 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 SDHBP21912 280 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 GABRR2P28476 465 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 MMP15P51511 669 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 GBX2P52951 348 aaPredicted RBP13.28□□□□□ -0.28
SRP54-202ENST00000546080 DGCR2P98153 550 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 LASP1Q14847 261 aaKnown RBP13.28□□□□□ -0.28
SRP54-202ENST00000546080 POM121L1PQ3SYA9 428 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 ZNF311Q5JNZ3 666 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 ASTLQ6HA08 431 aaPredicted RBP13.28□□□□□ -0.28
SRP54-202ENST00000546080 ZNF620Q6ZNG0 422 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 C17orf64Q86WR6 236 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 GID4Q8IVV7 300 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 ANKRD53Q8N9V6 530 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 OR2T33Q8NG76 320 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 OR5W2Q8NH69 310 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 OR56B4Q8NH76 319 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 DIO2Q92813 273 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 KLK6Q92876 244 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 ZFP3Q96NJ6 502 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 C7orf50Q9BRJ6 194 aaKnown RBP13.28□□□□□ -0.28
SRP54-202ENST00000546080 ZCCHC2Q9C0B9 1178 aaKnown RBP13.28□□□□□ -0.28
SRP54-202ENST00000546080 ZNF436Q9C0F3 470 aaPredicted RBP13.28□□□□□ -0.28
SRP54-202ENST00000546080 ACTR6Q9GZN1 396 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 RHBGQ9H310 441 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 METTL17Q9H7H0 456 aaPredicted RBP13.28□□□□□ -0.28
SRP54-202ENST00000546080 BEX1Q9HBH7 125 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 ZC4H2Q9NQZ6 224 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 KIF25Q9UIL4 384 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 SCML1Q9UN30 329 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 MRPS7Q9Y2R9 242 aaKnown RBP13.28□□□□□ -0.28
SRP54-202ENST00000546080 CHST2Q9Y4C5 530 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 INSL5Q9Y5Q6 135 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 CKAP5Q14008 2032 aa13.28□□□□□ -0.28
SRP54-202ENST00000546080 NUP210Q8TEM1 1887 aaPredicted RBP13.27□□□□□ -0.28
SRP54-202ENST00000546080 J3QRE1 110 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 UBL3O95164 117 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 HRGP04196 525 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 HMGN1P05114 100 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 ACSM4P0C7M7 580 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 DRD2P14416 443 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 ZP3P21754 424 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 BMP8BP34820 402 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 FLT3LGP49771 235 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 NCBP2P52298 156 aaKnown RBP eCLIP13.27□□□□□ -0.28
SRP54-202ENST00000546080 ZP1P60852 638 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 WASH2PQ6VEQ5 465 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 BMP8AQ7Z5Y6 402 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 CEACAM19Q7Z692 300 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 RNF180Q86T96 592 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 OR2T4Q8NH00 348 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 MYLIPQ8WY64 445 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 AMDHD1Q96NU7 426 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 AIF1LQ9BQI0 150 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 FAIM2Q9BWQ8 316 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 EPHX3Q9H6B9 360 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 PRKAG2Q9UGJ0 569 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 ENTPD4Q9Y227 616 aa13.27□□□□□ -0.28
SRP54-202ENST00000546080 A0A0G2JK05 382 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 DAPL1A0PJW8 107 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 LRRN3E7EW58 273 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 PGRMC2O15173 223 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 EFEMP2O95967 443 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 ALPPL2P10696 532 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 C4BPBP20851 252 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 IL32P24001 234 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 NTSP30990 170 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 PTGER1P34995 402 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 GCGRP47871 477 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 MAP2K6P52564 334 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 TSPAN5P62079 268 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 SLC3A1Q07837 685 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 TRAM1Q15629 374 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 SLC25A35Q3KQZ1 300 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 TMEM81Q6P7N7 255 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 ARSKQ6UWY0 536 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 KIAA1324Q6UXG2 1013 aaKnown RBP13.27□□□□□ -0.29
SRP54-202ENST00000546080 DPPA4Q7L190 304 aa13.27□□□□□ -0.29
SRP54-202ENST00000546080 NLRC3Q7RTR2 1065 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms