RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 PKLRP30613 574 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 EEF1A1P68104 462 aaKnown RBP8.11□□□□□ -1.11
CLIP1-218ENST00000545889 GALNT1Q10472 559 aaPredicted RBP8.11□□□□□ -1.11
CLIP1-218ENST00000545889 VWA2Q5GFL6 755 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 WDR53Q7Z5U6 358 aaPredicted RBP8.11□□□□□ -1.11
CLIP1-218ENST00000545889 PRR22Q8IZ63 422 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 PIAS4Q8N2W9 510 aaPredicted RBP8.11□□□□□ -1.11
CLIP1-218ENST00000545889 ACTRT3Q9BYD9 372 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 TREX1Q9NSU2 369 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 MLXQ9UH92 298 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 MTCH2Q9Y6C9 303 aa8.11□□□□□ -1.11
CLIP1-218ENST00000545889 TEX46H3BTG2 121 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 SSX5O60225 188 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 CLEC2LP0C7M8 214 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 HK1P19367 917 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 APLNRP35414 380 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 POU3F4P49335 361 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 AGTR2P50052 363 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 TPMTP51580 245 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF140P52738 457 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-218ENST00000545889 HK3P52790 923 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 DIO3P55073 304 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 AP3S2P59780 193 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 PLGLAQ15195 96 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 QPRTQ15274 297 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 C21orf62-AS1Q17RA5 79 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 OR56A3Q8NH54 315 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 BBS10Q8TAM1 723 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 DNAJA4Q8WW22 397 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-218ENST00000545889 NR4A3Q92570 626 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 DDIT4LQ96D03 193 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF419Q96HQ0 510 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-218ENST00000545889 OR52B2Q96RD2 323 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 TIMM29Q9BSF4 260 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 IER2Q9BTL4 223 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 POLR2J2Q9GZM3 115 aaKnown RBP8.1□□□□□ -1.11
CLIP1-218ENST00000545889 SLA2Q9H6Q3 261 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 RDH8Q9NYR8 311 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 KCMF1Q9P0J7 381 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 REV1Q9UBZ9 1251 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 PLEKHA6Q9Y2H5 1048 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 NARSO43776 548 aaKnown RBP8.1□□□□□ -1.11
CLIP1-218ENST00000545889 FMO6PO60774 539 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 GLSO94925 669 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-218ENST00000545889 PEX11BO96011 259 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 DCKP27707 260 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 ETV1P50549 477 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 METAP1P53582 386 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 GPLD1P80108 840 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 IL18R1Q13478 541 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 IL18Q14116 193 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 MELKQ14680 651 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 SWI5Q1ZZU3 235 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 PGM2L1Q6PCE3 622 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 LRFN4Q6PJG9 635 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 MAMDC2Q7Z304 686 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-218ENST00000545889 UEVLDQ8IX04 471 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 CELF2-AS1Q8N7Q2 184 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 DEDD2Q8WXF8 326 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 ZFP3Q96NJ6 502 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 NODALQ96S42 347 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 CDX2Q99626 313 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-218ENST00000545889 MRPS2Q9Y399 296 aaKnown RBP8.1□□□□□ -1.11
CLIP1-218ENST00000545889 EMC9Q9Y3B6 208 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 FKBP7Q9Y680 259 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 MYO10Q9HD67 2058 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 TRGV8A0A0C4DH27 118 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 OTOL1A6NHN0 477 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-218ENST00000545889 KLRC4-KLRK1H3BQV0 150 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF821O75541 412 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-218ENST00000545889 SNAP29O95721 258 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 F10P00742 488 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 HEXAP06865 529 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 HTR1AP08908 422 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 IL7P13232 177 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 GABRB3P28472 473 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 GCAP28676 217 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 GPR85P60893 370 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 HSD11B2P80365 405 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 TLE3Q04726 772 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 IQCCQ4KMZ1 466 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 TMEM215Q68D42 235 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 CFAP77Q6ZQR2 320 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 BEND4Q6ZU67 534 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 LRRC17Q8N6Y2 441 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 HUS1BQ8NHY5 278 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 UFD1Q92890 307 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 TBC1D20Q96BZ9 403 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 CENPNQ96H22 339 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-218ENST00000545889 ERMAPQ96PL5 475 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-218ENST00000545889 NANOGQ9H9S0 305 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 POPDC3Q9HBV1 291 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 SRA1Q9HD15 236 aaKnown RBP8.1□□□□□ -1.11
CLIP1-218ENST00000545889 DNAJC27Q9NZQ0 273 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 FAM240BA0A1B0GVZ2 78 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 ANKRD28O15084 1053 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 WDPCPO95876 746 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 DHFRP00374 187 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 CSF2P04141 144 aa8.1□□□□□ -1.11
CLIP1-218ENST00000545889 M6PRP20645 277 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms