RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 CASD1Q96PB1 797 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 POLR1EQ9GZS1 481 aaKnown RBP3.44□□□□□ -1.86
SNHG1-222ENST00000545308 KAT8Q9H7Z6 458 aaKnown RBP3.44□□□□□ -1.86
SNHG1-222ENST00000545308 IL1RAPQ9NPH3 570 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 FARSBQ9NSD9 589 aaKnown RBP3.44□□□□□ -1.86
SNHG1-222ENST00000545308 AGPAT5Q9NUQ2 364 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 TEX10Q9NXF1 929 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-222ENST00000545308 GDAP2Q9NXN4 497 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 SMPD3Q9NY59 655 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-222ENST00000545308 ATP6V1HQ9UI12 483 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 IKZF3Q9UKT9 509 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 SNX6Q9UNH7 406 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 PTPRZ1P23471 2315 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-222ENST00000545308 PRRC2BQ5JSZ5 2229 aaKnown RBP3.44□□□□□ -1.86
SNHG1-222ENST00000545308 ELP1O95163 1332 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 A0A087X002 238 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 ZSCAN5CA6NGD5 496 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-222ENST00000545308 WASHC1A8K0Z3 465 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 WASH3PC4AMC7 463 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 NEDD8-MDP1E9PL57 170 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 K7EQD1 137 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 IMPA2O14732 288 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 DCXO43602 365 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 TBX19O60806 448 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 CABYRO75952 493 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 NXPH2O95156 264 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 NXPH4O95158 308 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 SLC25A27O95847 323 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 OAS1P00973 400 aaKnown RBP3.43□□□□□ -1.86
SNHG1-222ENST00000545308 IGKV3-20P01619 116 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 CHRNA1P02708 482 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 ANXA4P09525 319 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-222ENST00000545308 GLRA2P23416 452 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 HTR2AP28223 471 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 AXLP30530 894 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 CA8P35219 290 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 RFC2P35250 354 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 CYLC1P35663 651 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-222ENST00000545308 MMP12P39900 470 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 PTGER3P43115 390 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 TSFMP43897 325 aaKnown RBP3.43□□□□□ -1.86
SNHG1-222ENST00000545308 ACADVLP49748 655 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 RAG2P55895 527 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 PPIAP62937 165 aaKnown RBP3.43□□□□□ -1.86
SNHG1-222ENST00000545308 RPS27AP62979 156 aaKnown RBP3.43□□□□□ -1.86
SNHG1-222ENST00000545308 CDKN3Q16667 212 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 HAGHQ16775 308 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 PARP6Q2NL67 630 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 CENPPQ6IPU0 288 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 WASH2PQ6VEQ5 465 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 LPCAT2Q7L5N7 544 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 TBC1D10CQ8IV04 446 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 DCUN1D3Q8IWE4 304 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 PYROXD2Q8N2H3 581 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 C11orf45Q8TAV5 145 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 SHC3Q92529 594 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 SLCO2A1Q92959 643 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 LRR1Q96L50 414 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 VSTM2LQ96N03 204 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 PGLYRP2Q96PD5 576 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 ALKBH3Q96Q83 286 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-222ENST00000545308 VPS35Q96QK1 796 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 F2RL3Q96RI0 385 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 EPYCQ99645 322 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 EDEM2Q9BV94 578 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 CLEC7AQ9BXN2 247 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 ALG9Q9H6U8 611 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 COG4Q9H9E3 785 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 KCNK13Q9HB14 408 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 NRN1Q9NPD7 142 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 TRPV5Q9NQA5 729 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 ATAD3AQ9NVI7 634 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 GPR83Q9NYM4 423 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 NLGN3Q9NZ94 848 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 TUBGCP4Q9UGJ1 667 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 BAIAP2L1Q9UHR4 511 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 FZR1Q9UM11 496 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 CACNA1AO00555 2505 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 REV3LO60673 3130 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 A0A1B0GUL6 1792 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 LOC285556D6RIA3 1793 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 SALL1Q9NSC2 1324 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 WDFY4Q6ZS81 3184 aa3.43□□□□□ -1.86
SNHG1-222ENST00000545308 A0A0A6YYD4 124 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 TRBV5-4A0A0C4DH59 114 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 ASB14A6NK59 587 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 HHLA1C9JL84 531 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 SLCO1B7G3V0H7 640 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 INPP4BO15327 924 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 MTRF1O75570 445 aaKnown RBP3.42□□□□□ -1.86
SNHG1-222ENST00000545308 TOXO94900 526 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 MFN2O95140 757 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 AMBPP02760 352 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 ZNF853P0CG23 659 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 CYBAP13498 195 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 ATP6V1C1P21283 382 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 OTX2P32243 289 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 HTR5AP47898 357 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 PEX3P56589 373 aa3.42□□□□□ -1.86
SNHG1-222ENST00000545308 KRTAP10-5P60370 271 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms