RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 ZFP3Q96NJ6 502 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 BTBD2Q9BX70 525 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 ACTRT3Q9BYD9 372 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 NUF2Q9BZD4 464 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 HOXD1Q9GZZ0 328 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 ACBD3Q9H3P7 528 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 PIGUQ9H490 435 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 UBQLN4Q9NRR5 601 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 TNFRSF10DQ9UBN6 386 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 GIMAP2Q9UG22 337 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 CAMK2AQ9UQM7 478 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 SLC6A5Q9Y345 797 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 DCHS2Q6V1P9 2916 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 C2orf72A6NCS6 295 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 ALG1L2C9J202 215 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 KLF11O14901 512 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 SCO2O43819 266 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 SNNO75324 88 aaPredicted RBP10.73□□□□□ -0.69
HDAC4-216ENST00000544989 NME6O75414 186 aaPredicted RBP10.73□□□□□ -0.69
HDAC4-216ENST00000544989 KCNK2O95069 426 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 C6orf47O95873 294 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 AK1P00568 194 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 HMGN2P05204 90 aaKnown RBP10.73□□□□□ -0.69
HDAC4-216ENST00000544989 ATP6V1C1P21283 382 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 TBXA2RP21731 343 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 GRNP28799 593 aaKnown RBP10.73□□□□□ -0.69
HDAC4-216ENST00000544989 SSTR2P30874 369 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 KIR3DL1P43629 444 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 GFRA1P56159 465 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 WDR4P57081 412 aaKnown RBP10.73□□□□□ -0.69
HDAC4-216ENST00000544989 EEFSECP57772 596 aaKnown RBP10.73□□□□□ -0.69
HDAC4-216ENST00000544989 PGS1Q32NB8 556 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 EXOSC6Q5RKV6 272 aaKnown RBP10.73□□□□□ -0.69
HDAC4-216ENST00000544989 CDC73Q6P1J9 531 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 CCDC71Q8IV32 467 aaPredicted RBP10.73□□□□□ -0.69
HDAC4-216ENST00000544989 RPRMLQ8N4K4 120 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 KRTCAP2Q8N6L1 136 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 GOLGA6L1Q8N7Z2 621 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 SLC16A11Q8NCK7 471 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 FAM110BQ8TC76 370 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 MGARPQ8TDB4 240 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 ADAMTS15Q8TE58 950 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 PIK3R3Q92569 461 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 WDYHV1Q96HA8 205 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 UCN2Q96RP3 112 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 TM9SF2Q99805 663 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 PIGQQ9BRB3 760 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 C20orf27Q9GZN8 174 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 ENKD1Q9H0I2 346 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 MANSC1Q9H8J5 431 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 ZNF395Q9H8N7 513 aaPredicted RBP10.73□□□□□ -0.69
HDAC4-216ENST00000544989 SIRT3Q9NTG7 399 aaPredicted RBP10.73□□□□□ -0.69
HDAC4-216ENST00000544989 ZNF629Q9UEG4 869 aaPredicted RBP10.73□□□□□ -0.69
HDAC4-216ENST00000544989 FBXL2Q9UKC9 423 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 NIPBLQ6KC79 2804 aaeCLIP10.73□□□□□ -0.69
HDAC4-216ENST00000544989 FREM3P0C091 2139 aa10.73□□□□□ -0.69
HDAC4-216ENST00000544989 A0A087WZY1 265 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 A0A0G2JNJ9 132 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 PRSS51A0A1B0GVH4 220 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 A0A1W2PQD3 144 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 GXYLT2A0PJZ3 443 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 FAM90A27PA6NNH2 459 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 H0Y3Z8 333 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 H3BNH8 94 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 SCDO00767 359 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 NDUFB5O43674 189 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 TOXO94900 526 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 ANGPTL1O95841 491 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 AGR2O95994 175 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 IL18BPO95998 194 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 ACP2P11117 423 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 PEPDP12955 493 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 CEACAM8P31997 349 aaPredicted RBP10.72□□□□□ -0.69
HDAC4-216ENST00000544989 TXNL4AP83876 142 aaKnown RBP10.72□□□□□ -0.69
HDAC4-216ENST00000544989 OCRLQ01968 901 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 LASP1Q14847 261 aaKnown RBP10.72□□□□□ -0.69
HDAC4-216ENST00000544989 DUSP5Q16690 384 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 GRAMD1BQ3KR37 738 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 CHMP1BQ7LBR1 199 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 WDR53Q7Z5U6 358 aaPredicted RBP10.72□□□□□ -0.69
HDAC4-216ENST00000544989 MTERF4Q7Z6M4 381 aaKnown RBP10.72□□□□□ -0.69
HDAC4-216ENST00000544989 MCEMP1Q8IX19 187 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 ACBD4Q8NC06 268 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 OR2M3Q8NG83 312 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 DUSP19Q8WTR2 217 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 C1GALT1C1Q96EU7 318 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 C14orf79Q96F83 325 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 PPP1R36Q96LQ0 422 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 ZBTB18Q99592 522 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 TREX2Q9BQ50 279 aaPredicted RBP10.72□□□□□ -0.69
HDAC4-216ENST00000544989 DSN1Q9H410 356 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 PNPOQ9NVS9 261 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 Q9UFV3 132 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 FOXD3Q9UJU5 478 aaPredicted RBP10.72□□□□□ -0.69
HDAC4-216ENST00000544989 NCKAP5O14513 1909 aa10.72□□□□□ -0.69
HDAC4-216ENST00000544989 MBD3L4A6NDZ8 208 aaPredicted RBP10.71□□□□□ -0.69
HDAC4-216ENST00000544989 MBD3L3A6NE82 208 aaPredicted RBP10.71□□□□□ -0.69
HDAC4-216ENST00000544989 MBD3L5A6NJ08 208 aaPredicted RBP10.71□□□□□ -0.69
HDAC4-216ENST00000544989 E9PBE3 544 aa10.71□□□□□ -0.69
HDAC4-216ENST00000544989 ZIC3O60481 467 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms