RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 C16orf62Q7Z3J2 963 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 WDR53Q7Z5U6 358 aaPredicted RBP5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 CAMKMTQ7Z624 323 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 GRAMD2AQ8IUY3 354 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 MCEMP1Q8IX19 187 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 OR8J2Q8NGG1 315 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 LRRC8CQ8TDW0 803 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 ACTRT2Q8TDY3 377 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 DOK4Q8TEW6 326 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 WNT2BQ93097 391 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 ZBTB8AQ96BR9 441 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 TESCQ96BS2 214 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 COQ8BQ96D53 544 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 C14orf79Q96F83 325 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 RMND5BQ96G75 393 aaPredicted RBP5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 TIMP4Q99727 224 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 SLC39A3Q9BRY0 314 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 C1orf50Q9BV19 199 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 SFXN3Q9BWM7 321 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 PRRG4Q9BZD6 226 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 OR2B2Q9GZK3 357 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 PRDM14Q9GZV8 571 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 UBQLN3Q9H347 655 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 C12orf65Q9H3J6 166 aaKnown RBP5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 RAD21L1Q9H4I0 556 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 RABEP2Q9H5N1 569 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 MEAF6Q9HAF1 191 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 POLE3Q9NRF9 147 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 GLRX2Q9NS18 164 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 PNPLA3Q9NST1 481 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 KCNN3Q9UGI6 736 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 BAIAP2L1Q9UHR4 511 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 MCTS1Q9ULC4 181 aaKnown RBP5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 DTX4Q9Y2E6 619 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 CCL27Q9Y4X3 112 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 AP4B1Q9Y6B7 739 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 TACC2O95359 2948 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 NINQ8N4C6 2090 aa5.11□□□□□ -1.59
CLSTN3-215ENST00000544584 A0A0G2JMM0 328 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 A0A1W2PPB8 328 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 A0A1W2PQD3 144 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 A0A1W2PRS3 328 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 PINLYPA6NC86 204 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 LRRC3CA6NJW4 275 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 KIR3DP1A8MWS1 328 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 HMGB1P1B2RPK0 211 aaPredicted RBP5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 ALG1L2C9J202 215 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 E9PBE3 544 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 CASKO14936 926 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 UBDO15205 165 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 SCO2O43819 266 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 ZNF354AO60765 605 aaPredicted RBP5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 TNFRSF21O75509 655 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 STX11O75558 287 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 NKX2-2O95096 273 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 PSMG1O95456 288 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 SYNGR4O95473 234 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 ANP32DO95626 131 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 KRT75O95678 551 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 ANGPTL1O95841 491 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 NUDT14O95848 222 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 PLGP00747 810 aaPredicted RBP5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 HMGN2P05204 90 aaKnown RBP5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 RFPL3SP0C7P2 107 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 DHRS4L1P0CG22 281 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 GLI4P10075 376 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 G6PDP11413 515 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 ZNF17P17021 662 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 BMP7P18075 431 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 HK1P19367 917 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 MATN1P21941 496 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 BMP5P22003 454 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 UQCRC2P22695 453 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 TACR1P25103 407 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 ADH6P28332 368 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 KHKP50053 298 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 ASCL1P50553 236 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 SUMO3P55854 103 aaPredicted RBP5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 CORO7P57737 925 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 NUP107P57740 925 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 ADORA2A-AS1P86434 159 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 PSG6Q00889 435 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 SRYQ05066 204 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 CRYZQ08257 329 aaKnown RBP5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 MYBPHQ13203 477 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 SGCBQ16585 318 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 GSTA3Q16772 222 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 ACSF3Q4G176 576 aaPredicted RBP5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 FLYWCH1Q4VC44 716 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 TNFAIP8L3Q5GJ75 292 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 WIPI1Q5MNZ9 446 aaPredicted RBP5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 BEND6Q5SZJ8 279 aaPredicted RBP5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 BICRALQ6AI39 1079 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 OGFOD2Q6N063 350 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 MFSD12Q6NUT3 480 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 FAM180BQ6P0A1 224 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 CDC73Q6P1J9 531 aa5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 MEX3BQ6ZN04 569 aaKnown RBP5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 EIF3MQ7L2H7 374 aaKnown RBP5.1□□□□□ -1.59
CLSTN3-215ENST00000544584 ZNF551Q7Z340 670 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms