RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 IL11P20809 199 aa20.28■□□□□ 0.84
CDKN3-207ENST00000543789 ATP5F1P24539 256 aaPredicted RBP20.28■□□□□ 0.84
CDKN3-207ENST00000543789 NTSP30990 170 aa20.28■□□□□ 0.84
CDKN3-207ENST00000543789 EIF1AXP47813 144 aaKnown RBP20.28■□□□□ 0.84
CDKN3-207ENST00000543789 PRKAA2P54646 552 aa20.28■□□□□ 0.84
CDKN3-207ENST00000543789 NR1H2P55055 460 aa20.28■□□□□ 0.84
CDKN3-207ENST00000543789 PKNOX1P55347 436 aa20.28■□□□□ 0.84
CDKN3-207ENST00000543789 CTBP2P56545 445 aa20.28■□□□□ 0.84
CDKN3-207ENST00000543789 ZNF763Q0D2J5 394 aa20.28■□□□□ 0.84
CDKN3-207ENST00000543789 LCP2Q13094 533 aa20.28■□□□□ 0.84
CDKN3-207ENST00000543789 FAM71E1Q6IPT2 247 aa20.28■□□□□ 0.84
CDKN3-207ENST00000543789 STAC2Q6ZMT1 411 aa20.28■□□□□ 0.84
CDKN3-207ENST00000543789 ZNF704Q6ZNC4 412 aaPredicted RBP20.28■□□□□ 0.84
CDKN3-207ENST00000543789 SLC22A9Q8IVM8 553 aa20.28■□□□□ 0.84
CDKN3-207ENST00000543789 ELP4Q96EB1 424 aa20.28■□□□□ 0.84
CDKN3-207ENST00000543789 GMPPAQ96IJ6 420 aaPredicted RBP20.28■□□□□ 0.84
CDKN3-207ENST00000543789 LMF2Q9BU23 707 aaKnown RBP20.28■□□□□ 0.84
CDKN3-207ENST00000543789 GLIPR2Q9H4G4 154 aa20.28■□□□□ 0.84
CDKN3-207ENST00000543789 C3orf14Q9HBI5 128 aa20.28■□□□□ 0.84
CDKN3-207ENST00000543789 FANCFQ9NPI8 374 aa20.28■□□□□ 0.84
CDKN3-207ENST00000543789 SHISA8B8ZZ34 492 aa20.27■□□□□ 0.84
CDKN3-207ENST00000543789 EIF1AYO14602 144 aaKnown RBP20.27■□□□□ 0.84
CDKN3-207ENST00000543789 GABRA3P34903 492 aa20.27■□□□□ 0.84
CDKN3-207ENST00000543789 PRR5P85299 388 aa20.27■□□□□ 0.84
CDKN3-207ENST00000543789 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.27■□□□□ 0.84
CDKN3-207ENST00000543789 APOOLQ6UXV4 268 aa20.27■□□□□ 0.84
CDKN3-207ENST00000543789 TIFABQ6ZNK6 161 aa20.27■□□□□ 0.84
CDKN3-207ENST00000543789 IFT81Q8WYA0 676 aa20.27■□□□□ 0.84
CDKN3-207ENST00000543789 AMDHD1Q96NU7 426 aa20.27■□□□□ 0.84
CDKN3-207ENST00000543789 KCNA7Q96RP8 456 aa20.27■□□□□ 0.84
CDKN3-207ENST00000543789 FMO2Q99518 471 aa20.27■□□□□ 0.84
CDKN3-207ENST00000543789 PAQR5Q9NXK6 330 aaPredicted RBP20.27■□□□□ 0.84
CDKN3-207ENST00000543789 CLEC4AQ9UMR7 237 aa20.27■□□□□ 0.84
CDKN3-207ENST00000543789 WBP11Q9Y2W2 641 aaKnown RBP20.27■□□□□ 0.84
CDKN3-207ENST00000543789 A0A087WUV0 522 aaPredicted RBP20.26■□□□□ 0.83
CDKN3-207ENST00000543789 SS18L1O75177 396 aaPredicted RBP20.26■□□□□ 0.83
CDKN3-207ENST00000543789 PLAUP00749 431 aa20.26■□□□□ 0.83
CDKN3-207ENST00000543789 ATP5J2P56134 94 aa20.26■□□□□ 0.83
CDKN3-207ENST00000543789 LCA5Q86VQ0 697 aa20.26■□□□□ 0.83
CDKN3-207ENST00000543789 WDR75Q8IWA0 830 aaKnown RBP20.26■□□□□ 0.83
CDKN3-207ENST00000543789 C17orf53Q8N3J3 647 aaPredicted RBP20.26■□□□□ 0.83
CDKN3-207ENST00000543789 OR10D3Q8NH80 312 aa20.26■□□□□ 0.83
CDKN3-207ENST00000543789 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.26■□□□□ 0.83
CDKN3-207ENST00000543789 L3HYPDHQ96EM0 354 aa20.26■□□□□ 0.83
CDKN3-207ENST00000543789 PLPPR2Q96GM1 343 aa20.26■□□□□ 0.83
CDKN3-207ENST00000543789 MCTS1Q9ULC4 181 aaKnown RBP20.26■□□□□ 0.83
CDKN3-207ENST00000543789 VDAC3Q9Y277 283 aa20.26■□□□□ 0.83
CDKN3-207ENST00000543789 TTC36A6NLP5 189 aa20.25■□□□□ 0.83
CDKN3-207ENST00000543789 HS3ST1O14792 307 aa20.25■□□□□ 0.83
CDKN3-207ENST00000543789 KCNH1O95259 989 aa20.25■□□□□ 0.83
CDKN3-207ENST00000543789 GRAMD1BQ3KR37 738 aa20.25■□□□□ 0.83
CDKN3-207ENST00000543789 BEND4Q6ZU67 534 aa20.25■□□□□ 0.83
CDKN3-207ENST00000543789 ZNF611Q8N823 705 aa20.25■□□□□ 0.83
CDKN3-207ENST00000543789 SPATA3Q8NHX4 192 aa20.25■□□□□ 0.83
CDKN3-207ENST00000543789 MYNNQ9NPC7 610 aa20.25■□□□□ 0.83
CDKN3-207ENST00000543789 GLRX2Q9NS18 164 aa20.25■□□□□ 0.83
CDKN3-207ENST00000543789 ADAM21Q9UKJ8 722 aa20.25■□□□□ 0.83
CDKN3-207ENST00000543789 TLN2Q9Y4G6 2542 aa20.24■□□□□ 0.83
CDKN3-207ENST00000543789 A0A087WZY1 265 aa20.24■□□□□ 0.83
CDKN3-207ENST00000543789 EXOC1LA0A1B0GW35 172 aa20.24■□□□□ 0.83
CDKN3-207ENST00000543789 GXYLT2A0PJZ3 443 aa20.24■□□□□ 0.83
CDKN3-207ENST00000543789 SYNGR4O95473 234 aa20.24■□□□□ 0.83
CDKN3-207ENST00000543789 IGKV1D-16P01601 117 aa20.24■□□□□ 0.83
CDKN3-207ENST00000543789 ZNF17P17021 662 aa20.24■□□□□ 0.83
CDKN3-207ENST00000543789 IMPG1Q17R60 797 aa20.24■□□□□ 0.83
CDKN3-207ENST00000543789 CXXC5Q7LFL8 322 aaKnown RBP20.24■□□□□ 0.83
CDKN3-207ENST00000543789 WFDC8Q8IUA0 241 aa20.24■□□□□ 0.83
CDKN3-207ENST00000543789 MMGT1Q8N4V1 131 aa20.24■□□□□ 0.83
CDKN3-207ENST00000543789 FAM76AQ8TAV0 307 aa20.24■□□□□ 0.83
CDKN3-207ENST00000543789 PIK3R3Q92569 461 aa20.24■□□□□ 0.83
CDKN3-207ENST00000543789 ADGRG7Q96K78 797 aa20.24■□□□□ 0.83
CDKN3-207ENST00000543789 TMEM204Q9BSN7 226 aa20.24■□□□□ 0.83
CDKN3-207ENST00000543789 ACTR6Q9GZN1 396 aa20.24■□□□□ 0.83
CDKN3-207ENST00000543789 OR10A4Q9H209 315 aa20.24■□□□□ 0.83
CDKN3-207ENST00000543789 HHATLQ9HCP6 504 aa20.24■□□□□ 0.83
CDKN3-207ENST00000543789 MID1IP1Q9NPA3 183 aa20.24■□□□□ 0.83
CDKN3-207ENST00000543789 GPR52Q9Y2T5 361 aa20.24■□□□□ 0.83
CDKN3-207ENST00000543789 FBN3Q75N90 2809 aa20.24■□□□□ 0.83
CDKN3-207ENST00000543789 ADAMDEC1O15204 470 aa20.23■□□□□ 0.83
CDKN3-207ENST00000543789 OPN1LWP04000 364 aa20.23■□□□□ 0.83
CDKN3-207ENST00000543789 FOXA1P55317 472 aa20.23■□□□□ 0.83
CDKN3-207ENST00000543789 TNK1Q13470 666 aa20.23■□□□□ 0.83
CDKN3-207ENST00000543789 STK32CQ86UX6 486 aa20.23■□□□□ 0.83
CDKN3-207ENST00000543789 GTPBP8Q8N3Z3 284 aaPredicted RBP20.23■□□□□ 0.83
CDKN3-207ENST00000543789 GPR151Q8TDV0 419 aa20.23■□□□□ 0.83
CDKN3-207ENST00000543789 POLR3HQ9Y535 204 aaPredicted RBP20.23■□□□□ 0.83
CDKN3-207ENST00000543789 ALG1L2C9J202 215 aa20.22■□□□□ 0.83
CDKN3-207ENST00000543789 NDUFB5O43674 189 aa20.22■□□□□ 0.83
CDKN3-207ENST00000543789 CXCL13O43927 109 aa20.22■□□□□ 0.83
CDKN3-207ENST00000543789 CRLF1O75462 422 aa20.22■□□□□ 0.83
CDKN3-207ENST00000543789 IFI6P09912 130 aa20.22■□□□□ 0.83
CDKN3-207ENST00000543789 RAC1P63000 192 aa20.22■□□□□ 0.83
CDKN3-207ENST00000543789 CAPRIN1Q14444 709 aaKnown RBP20.22■□□□□ 0.83
CDKN3-207ENST00000543789 CTU2Q2VPK5 515 aaKnown RBP20.22■□□□□ 0.83
CDKN3-207ENST00000543789 CPTPQ5TA50 214 aa20.22■□□□□ 0.83
CDKN3-207ENST00000543789 GTF2IRD2BQ6EKJ0 949 aa20.22■□□□□ 0.83
CDKN3-207ENST00000543789 ESPNLQ6ZVH7 1005 aa20.22■□□□□ 0.83
CDKN3-207ENST00000543789 TRIM46Q7Z4K8 759 aa20.22■□□□□ 0.83
CDKN3-207ENST00000543789 GTF2IRD2Q86UP8 949 aa20.22■□□□□ 0.83
CDKN3-207ENST00000543789 EXOC3L1Q86VI1 746 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms