RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 PDE9AO76083 593 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 SORBS2O94875 1100 aaKnown RBP5.78□□□□□ -1.48
LTBR-212ENST00000543542 H6PDO95479 791 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 NUDT14O95848 222 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 C1QCP02747 245 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 IL7RP16871 459 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 TBXA2RP21731 343 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 TCEA1P23193 301 aaKnown RBP5.78□□□□□ -1.48
LTBR-212ENST00000543542 SLC6A2P23975 617 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 ELAVL4P26378 380 aaKnown RBP5.78□□□□□ -1.48
LTBR-212ENST00000543542 PTPN6P29350 595 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 PRDX6P30041 224 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 LCN1P31025 176 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 GCKP35557 465 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 MAP3K8P41279 467 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 MAGEA8P43361 318 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 CCR4P51679 360 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 MNAT1P51948 309 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 ATP12AP54707 1039 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 TLE1Q04724 770 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 RBPJQ06330 500 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 C17orf67Q0P5P2 114 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 OR5M10Q6IEU7 315 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 NANOGP8Q6NSW7 305 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 DLEU7Q6UYE1 221 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 OLIG3Q7RTU3 272 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 ARPINQ7Z6K5 226 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 HMGN2P46Q86SG4 172 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 ZAR1Q86SH2 424 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 ZNF605Q86T29 641 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 ATCAYQ86WG3 371 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 IFNEQ86WN2 208 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 KRT73Q86Y46 540 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 MSRB3Q8IXL7 192 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 PEX5LQ8IYB4 626 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 ZNF619Q8N2I2 560 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 ZNF843Q8N446 348 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 ANKFN1Q8N957 763 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 CHDHQ8NE62 594 aaPredicted RBP5.78□□□□□ -1.48
LTBR-212ENST00000543542 OR4C3Q8NH37 302 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 OR10A6Q8NH74 314 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 NFKBIDQ8NI38 313 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 FAM110BQ8TC76 370 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 SLC26A7Q8TE54 656 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 DUSP19Q8WTR2 217 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 HOXB13Q92826 284 aaPredicted RBP5.78□□□□□ -1.48
LTBR-212ENST00000543542 TMEM19Q96HH6 336 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 SH3YL1Q96HL8 342 aaPredicted RBP5.78□□□□□ -1.48
LTBR-212ENST00000543542 TMEM41AQ96HV5 264 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 NSL1Q96IY1 281 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 FRMD6Q96NE9 622 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 GNRHR2Q96P88 292 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 TRNT1Q96Q11 434 aaKnown RBP5.78□□□□□ -1.48
LTBR-212ENST00000543542 TAAR6Q96RI8 345 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 CPPED1Q9BRF8 314 aaPredicted RBP5.78□□□□□ -1.48
LTBR-212ENST00000543542 SLC39A3Q9BRY0 314 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 TTTY12Q9BZ98 90 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 TRIM8Q9BZR9 551 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 DEFB127Q9H1M4 99 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 PTGES2Q9H7Z7 377 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 NANOGQ9H9S0 305 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 HHATLQ9HCP6 504 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 ZFP64Q9NPA5 681 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 POLE3Q9NRF9 147 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.78□□□□□ -1.48
LTBR-212ENST00000543542 ASF1BQ9NVP2 202 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 FLRT3Q9NZU0 649 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 SEC14L3Q9UDX4 400 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 TAGLN3Q9UI15 199 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 ANGPT4Q9Y264 503 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 DTNAQ9Y4J8 743 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 WIF1Q9Y5W5 379 aa5.78□□□□□ -1.48
LTBR-212ENST00000543542 TRBV5-3A0A0A0MS03 114 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 A0A0G2JPF8 293 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 HNRNPCL2B2RXH8 293 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 HNRNPCL3B7ZW38 293 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 GSTA4O15217 222 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 HCRTR2O43614 444 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 FADS1O60427 444 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 HNRNPCL1O60812 293 aaKnown RBP5.77□□□□□ -1.49
LTBR-212ENST00000543542 GMNNO75496 209 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 CBR3O75828 277 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 DBIP07108 87 aaKnown RBP5.77□□□□□ -1.49
LTBR-212ENST00000543542 CHRM4P08173 479 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 NUDT7P0C024 238 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 HNRNPCL4P0DMR1 293 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 ARAFP10398 606 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 GPX2P18283 190 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 ENDOUP21128 410 aaKnown RBP5.77□□□□□ -1.49
LTBR-212ENST00000543542 MAGEA5P43359 124 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 ZNF41P51814 821 aaPredicted RBP5.77□□□□□ -1.49
LTBR-212ENST00000543542 CBX1P83916 185 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 CDK6Q00534 326 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 CHRNEQ04844 493 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 FUT5Q11128 374 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 SCARB2Q14108 478 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 SELPLGQ14242 412 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 SLC10A1Q14973 349 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 LARS2Q15031 903 aaKnown RBP5.77□□□□□ -1.49
LTBR-212ENST00000543542 ZNF630Q2M218 657 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms