RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 NOP53Q9NZM5 478 aaKnown RBP8.85□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PPP4R1LQ9P1A2 415 aa8.85□□□□□ -0.99
TNFRSF1A-214ENST00000543048 Q9UFV3 132 aa8.85□□□□□ -0.99
TNFRSF1A-214ENST00000543048 HAO1Q9UJM8 370 aa8.85□□□□□ -0.99
TNFRSF1A-214ENST00000543048 FBXL2Q9UKC9 423 aa8.85□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ABCG2Q9UNQ0 655 aa8.85□□□□□ -0.99
TNFRSF1A-214ENST00000543048 NKX2-6A6NCS4 301 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 FAM90A27PA6NNH2 459 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 SCO2O43819 266 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 UTS2O95399 124 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ALOX5P09917 674 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PRF1P14222 555 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 CPN1P15169 458 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 DPP4P27487 766 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 LCN1P31025 176 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 CEACAM8P31997 349 aaPredicted RBP8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 TIMP3P35625 211 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 RFX3P48380 749 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 CCT3P49368 545 aaKnown RBP8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PRIM2P49643 509 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 GYS2P54840 703 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 DSCR4P56555 118 aaPredicted RBP8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 C21orf58P58505 322 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 BST1Q10588 318 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PDCD2Q16342 344 aaPredicted RBP8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PGS1Q32NB8 556 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ACSF3Q4G176 576 aaPredicted RBP8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 AAGABQ6PD74 315 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ENPP6Q6UWR7 440 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 SZRD1Q7Z422 152 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 MARCH3Q86UD3 253 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 LACC1Q8IV20 430 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 KRTCAP2Q8N6L1 136 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 SLC16A11Q8NCK7 471 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 OR4K17Q8NGC6 315 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PSMA8Q8TAA3 256 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ZPLD1Q8TCW7 415 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 MGARPQ8TDB4 240 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 NUDT8Q8WV74 236 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PIK3R3Q92569 461 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 FAM120BQ96EK7 910 aaKnown RBP8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 RMND5BQ96G75 393 aaPredicted RBP8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PPP1R36Q96LQ0 422 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 MS4A4EQ96PG1 132 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 DUSP26Q9BV47 211 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 BHLHE41Q9C0J9 482 aaPredicted RBP8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 HHATLQ9HCP6 504 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 SIRT3Q9NTG7 399 aaPredicted RBP8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 INTS9Q9NV88 658 aaKnown RBP8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 THAP1Q9NVV9 213 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 FLRT3Q9NZU0 649 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 MED11Q9P086 117 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 SNX8Q9Y5X2 465 aa8.84□□□□□ -0.99
TNFRSF1A-214ENST00000543048 CD8B2A6NJW9 211 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 CFLARO15519 480 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 KCNK2O95069 426 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 IL2RAP01589 272 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 IGKV1D-16P01601 117 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 HMGN2P05204 90 aaKnown RBP8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 ACP2P11117 423 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 LBPP18428 481 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 TBXA2RP21731 343 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 CHMP24386 653 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 MDH1P40925 334 aaKnown RBP8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 STARP49675 285 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 GFRA1P56159 465 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 TFF3Q07654 80 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 C17orf67Q0P5P2 114 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 RCAN2Q14206 197 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 SLC25A35Q3KQZ1 300 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 GRAMD1BQ3KR37 738 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 GLYR1Q49A26 553 aaPredicted RBP8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 EXOSC6Q5RKV6 272 aaKnown RBP8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 DCST1Q5T197 706 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 NSUN5P2Q63ZY6 315 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 ATG16L1Q676U5 607 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 MFSD12Q6NUT3 480 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 MEX3BQ6ZN04 569 aaKnown RBP8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 SEM1Q6ZVN7 128 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 IFNEQ86WN2 208 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 LIX1LQ8IVB5 337 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 LRRC34Q8IZ02 419 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 FADS6Q8N9I5 356 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 ACBD4Q8NC06 268 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 TNIP2Q8NFZ5 429 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 OR2M3Q8NG83 312 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 OR56A1Q8NGH5 318 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 DYDC1Q8WWB3 177 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 MOAP1Q96BY2 351 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 TRIB1Q96RU8 372 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 STACQ99469 402 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 YIPF4Q9BSR8 244 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 BTBD2Q9BX70 525 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 ACTRT3Q9BYD9 372 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 NUF2Q9BZD4 464 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 TBL1XR1Q9BZK7 514 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 RTN4RQ9BZR6 473 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 DPY30Q9C005 99 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 PTGES2Q9H7Z7 377 aa8.83□□□□□ -1
TNFRSF1A-214ENST00000543048 ZFAND3Q9H8U3 227 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms