RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 METTL1Q9UBP6 276 aaKnown RBP5.46□□□□□ -1.54
XRCC4-206ENST00000542685 SH3BGRL2Q9UJC5 107 aa5.46□□□□□ -1.54
XRCC4-206ENST00000542685 SLC39A10Q9ULF5 831 aa5.46□□□□□ -1.54
XRCC4-206ENST00000542685 TBX20Q9UMR3 447 aa5.46□□□□□ -1.54
XRCC4-206ENST00000542685 RNF6Q9Y252 685 aa5.46□□□□□ -1.54
XRCC4-206ENST00000542685 PLEKHA6Q9Y2H5 1048 aa5.46□□□□□ -1.54
XRCC4-206ENST00000542685 PADI2Q9Y2J8 665 aa5.46□□□□□ -1.54
XRCC4-206ENST00000542685 ZSWIM8A7E2V4 1837 aa5.46□□□□□ -1.54
XRCC4-206ENST00000542685 SCN9AQ15858 1988 aa5.46□□□□□ -1.54
XRCC4-206ENST00000542685 CCDC187A0A096LP49 1063 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 C7orf66A4D0T2 115 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 ASB14A6NK59 587 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 TMEM189-UBE2V1I3L0A0 370 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 M0R233 179 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 AP3D1O14617 1153 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 MRASO14807 208 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 AKR7A2O43488 359 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 VEGFDO43915 354 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 PRKYO43930 277 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 SC5DO75845 299 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 MBP02144 154 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 OPN1MWP04001 364 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 RLN2P04090 185 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 HMBSP08397 361 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 STSP08842 583 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 LINC00614P0C842 121 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 OPN1MW2P0DN77 364 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 OPN1MW3P0DN78 364 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 ST6GAL1P15907 406 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 CBR1P16152 277 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 TPSB2P20231 275 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 PVALBP20472 110 aaPredicted RBP5.45□□□□□ -1.54
XRCC4-206ENST00000542685 ELK3P41970 407 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 MAGEA12P43365 314 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 MRPL19P49406 292 aaKnown RBP5.45□□□□□ -1.54
XRCC4-206ENST00000542685 GLUD2P49448 558 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 RBP2P50120 134 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 RAG2P55895 527 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 ISL1P61371 349 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 RPS6P62753 249 aaKnown RBP5.45□□□□□ -1.54
XRCC4-206ENST00000542685 PSPHP78330 225 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 SLC25A11Q02978 314 aaKnown RBP5.45□□□□□ -1.54
XRCC4-206ENST00000542685 GLO1Q04760 184 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 CD47Q08722 323 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 ELP6Q0PNE2 266 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 ILF3Q12906 894 aaKnown RBP eCLIP5.45□□□□□ -1.54
XRCC4-206ENST00000542685 ECH1Q13011 328 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 TPSAB1Q15661 275 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 GPR68Q15743 365 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 HADHQ16836 314 aaKnown RBP5.45□□□□□ -1.54
XRCC4-206ENST00000542685 SLC9B1Q4ZJI4 515 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 FNBP1LQ5T0N5 605 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 N4BP2L1Q5TBK1 243 aaPredicted RBP5.45□□□□□ -1.54
XRCC4-206ENST00000542685 MLIPQ5VWP3 458 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 ABLIM2Q6H8Q1 611 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 DHRS7BQ6IAN0 325 aaPredicted RBP5.45□□□□□ -1.54
XRCC4-206ENST00000542685 OR5M10Q6IEU7 315 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 PRR5LQ6MZQ0 368 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 TMEM107Q6UX40 140 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 NPSR1Q6W5P4 371 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 FAM92BQ6ZTR7 304 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 FAM57BQ71RH2 274 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 LRRC8DQ7L1W4 858 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 FAM122BQ7Z309 247 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 SLC46A3Q7Z3Q1 461 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 ZC3HC1Q86WB0 502 aaKnown RBP5.45□□□□□ -1.54
XRCC4-206ENST00000542685 ZFAND4Q86XD8 727 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 SPAG16Q8N0X2 631 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 THEM5Q8N1Q8 247 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 ZNF557Q8N988 423 aaPredicted RBP5.45□□□□□ -1.54
XRCC4-206ENST00000542685 GLIS1Q8NBF1 620 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 AGBL3Q8NEM8 1001 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 OR2T4Q8NH00 348 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 AKR7LQ8NHP1 331 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 SPATA22Q8NHS9 363 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 MPLKIPQ8TAP9 179 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 TCTEX1D2Q8WW35 142 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 SLC5A11Q8WWX8 675 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 TCEAL4Q96EI5 215 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 SCMH1Q96GD3 660 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 PRMT6Q96LA8 375 aaPredicted RBP5.45□□□□□ -1.54
XRCC4-206ENST00000542685 SFXN2Q96NB2 322 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 NEDD4LQ96PU5 975 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 SLC38A2Q96QD8 506 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 RBP7Q96R05 134 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 ZBTB18Q99592 522 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 RNF122Q9H9V4 155 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 POPDC2Q9HBU9 364 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 TMLHEQ9NVH6 421 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 PAK5Q9P286 719 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 EMCNQ9ULC0 261 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 AURKCQ9UQB9 309 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 ALG5Q9Y673 324 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 V9GYH0 126 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 ANK1P16157 1881 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 DENND4AQ7Z401 1863 aa5.45□□□□□ -1.54
XRCC4-206ENST00000542685 ZNF638Q14966 1978 aaKnown RBP5.44□□□□□ -1.54
XRCC4-206ENST00000542685 A0A1W2PQ09 198 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 SGK494L7N484 410 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 CYB561D2O14569 222 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms