RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-219	ENST00000542112	NPAS2	Q99743	824 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	REEP2	Q9BRK0	252 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	TMEM208	Q9BTX3	173 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	TRMO	Q9BU70	441 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	ZNF426	Q9BUY5	554 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	MRI1	Q9BV20	369 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	POTEKP	Q9BYX7	375 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	ARHGAP39	Q9C0H5	1083 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	HAPLN2	Q9GZV7	340 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	IL22	Q9GZX6	179 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	GABARAPL1	Q9H0R8	117 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	MMP28	Q9H239	520 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	PRDM13	Q9H4Q3	707 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	EXO5	Q9H790	373 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	SPON1	Q9HCB6	807 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	SIX2	Q9NPC8	291 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	KRCC1	Q9NPI7	259 aa	Predicted RBP	4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	ITM2C	Q9NQX7	267 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	PLSCR4	Q9NRQ2	329 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	POT1	Q9NUX5	634 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	C14orf119	Q9NWQ9	140 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	SMPD4	Q9NXE4	827 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	USP36	Q9P275	1121 aa	Known RBP	4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	PAK5	Q9P286	719 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	MARCO	Q9UEW3	520 aa	Predicted RBP	4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	RPH3AL	Q9UNE2	315 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	IGSF9B	Q9UPX0	1349 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	POFUT2	Q9Y2G5	429 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	YBX2	Q9Y2T7	364 aa	Known RBP	4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	AAR2	Q9Y312	384 aa	Known RBP	4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	STARD10	Q9Y365	291 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	TMED3	Q9Y3Q3	217 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	IRAK3	Q9Y616	596 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	SLCO1B1	Q9Y6L6	691 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	CDH10	Q9Y6N8	788 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112		V9GYS6	101 aa		4.08	□□□□□ -1.76
SNHG1-219	ENST00000542112	CCDC187	A0A096LP49	1063 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	TCRBV5S2	A0A599	114 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	URAD	A6NGE7	173 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	FAM159B	A6NKW6	160 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112		A8MWP6	167 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112		F8VP50	259 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	TLR4	O00206	839 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	DFFA	O00273	331 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	LDLRAD4	O15165	306 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	UBD	O15205	165 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	SLC16A4	O15374	487 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	OGG1	O15527	345 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	PPIH	O43447	177 aa	Known RBP	4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	SUV39H1	O43463	412 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	SLC25A17	O43808	307 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	XPNPEP2	O43895	674 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	CDC14B	O60729	498 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	CTAG2	O75638	210 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	STBD1	O95210	358 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	VNN2	O95498	520 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	MT-ND2	P03891	347 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	LPL	P06858	475 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	C8G	P07360	202 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	GIP	P09681	153 aa	Predicted RBP	4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	OR52Z1	P0C646	297 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	GKN3P	P0CG01	181 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	C1GALT1C1L	P0DN25	315 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	NR2F6	P10588	404 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	SLC2A2	P11168	524 aa	Predicted RBP	4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	FCER1A	P12319	257 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	CPN1	P15169	458 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	ABO	P16442	354 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	ERCC2	P18074	760 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	ATP6V1B2	P21281	511 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	LPO	P22079	712 aa	Predicted RBP	4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	NFYA	P23511	347 aa	Predicted RBP	4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	CD1B	P29016	333 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	PRDX5	P30044	214 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	SLC6A1	P30531	599 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	SDC4	P31431	198 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	GRK5	P34947	590 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	MATK	P42679	507 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	KCNQ1	P51787	676 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	HCCS	P53701	268 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	KLF3	P57682	345 aa	Predicted RBP	4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	SELENOV	P59797	346 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	RAC3	P60763	192 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	RAP2B	P61225	183 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	RPS6	P62753	249 aa	Known RBP	4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	YWHAH	Q04917	246 aa	Predicted RBP	4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	SRSF5	Q13243	272 aa	Known RBP	4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	MTM1	Q13496	603 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	PIN1	Q13526	163 aa	Predicted RBP	4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	GRM3	Q14832	879 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	TRAM1	Q15629	374 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	ZNF79	Q15937	498 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	PSG3	Q16557	428 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	CYP51A1	Q16850	503 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	EXOC3L2	Q2M3D2	409 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	C3orf38	Q5JPI3	329 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	FAM26F	Q5R3K3	315 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	PRAMEF19	Q5SWL8	479 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	IDNK	Q5T6J7	187 aa		4.07	□□□□□ -1.76
SNHG1-219	ENST00000542112	MEDAG	Q5VYS4	303 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms