RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 SUCOQ9UBS9 1254 aaKnown RBP8.59□□□□□ -1.03
DDX55-208ENST00000541259 POMPQ9Y244 141 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 ANGPT4Q9Y264 503 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 YARS2Q9Y2Z4 477 aaKnown RBP8.59□□□□□ -1.03
DDX55-208ENST00000541259 WDR45Q9Y484 360 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 A0A087WV48 116 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 TTLL8A6PVC2 850 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 M0QX08 132 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 KIAA0513O60268 411 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 ICOSLGO75144 302 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 STX11O75558 287 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 PPM1BO75688 479 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 UTS2O95399 124 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 AK1P00568 194 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 IL12BP29460 328 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 KDELR2P33947 212 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 ERFP50548 548 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 SSR4P51571 173 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 PNLIPRP2P54317 469 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 TMPRSS3P57727 454 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 AP2B1P63010 937 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 DMTNQ08495 405 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 BNIP2Q12982 314 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.58□□□□□ -1.04
DDX55-208ENST00000541259 ZNF791Q3KP31 576 aaPredicted RBP8.58□□□□□ -1.04
DDX55-208ENST00000541259 GRAMD1BQ3KR37 738 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 FLYWCH1Q4VC44 716 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 LRRC23Q53EV4 343 aaPredicted RBP8.58□□□□□ -1.04
DDX55-208ENST00000541259 AP1ARQ63HQ0 302 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 APOOLQ6UXV4 268 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 VRK2Q86Y07 508 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 SPPL2CQ8IUH8 684 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 APLFQ8IW19 511 aaPredicted RBP8.58□□□□□ -1.04
DDX55-208ENST00000541259 ZNF619Q8N2I2 560 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 SLC15A4Q8N697 577 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 METTL25Q8N6Q8 603 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 FAM13CQ8NE31 585 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 FDCSPQ8NFU4 85 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 OR10Q1Q8NGQ4 319 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 OR4C3Q8NH37 302 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 BBS10Q8TAM1 723 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 SLC22A8Q8TCC7 542 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 ASB15Q8WXK1 588 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 HGDQ93099 445 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 TAMM41Q96BW9 452 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 ASB9Q96DX5 294 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 CRELD1Q96HD1 420 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 ZNF354BQ96LW1 612 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 COL21A1Q96P44 957 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 NODALQ96S42 347 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 G6PC3Q9BUM1 346 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 MTHFD2LQ9H903 347 aaPredicted RBP8.58□□□□□ -1.04
DDX55-208ENST00000541259 PLA2G3Q9NZ20 509 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 SNX13Q9Y5W8 968 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 GPC6Q9Y625 555 aaPredicted RBP8.58□□□□□ -1.04
DDX55-208ENST00000541259 ACACBO00763 2458 aa8.58□□□□□ -1.04
DDX55-208ENST00000541259 DSPPQ9NZW4 1301 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 MPDZO75970 2070 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 TCRBV5S2A0A599 114 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 OR6C70A6NIJ9 312 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 CLDN24A6NM45 220 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 C17orf51A8MQB3 221 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 NPIPB9F8W1W9 429 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 TPST1O60507 370 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 UGT2B17O75795 530 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 CEACAM4O75871 244 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 MFN2O95140 757 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 WDPCPO95876 746 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 SERPINA1P01009 418 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 GUSBP08236 651 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 NAGAP17050 411 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 ATP6V1C1P21283 382 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 KRT20P35900 424 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 DCTP40126 519 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 CD96P40200 585 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 HLCSP50747 726 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 ATP12AP54707 1039 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 CXADRP78310 365 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 HPCAP84074 193 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 TRAP1Q12931 704 aaKnown RBP8.57□□□□□ -1.04
DDX55-208ENST00000541259 GNA13Q14344 377 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 NTRK2Q16620 822 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 TBR1Q16650 682 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 GLIPR1L2Q4G1C9 344 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 CRB2Q5IJ48 1285 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 PDZK1Q5T2W1 519 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 INTS11Q5TA45 600 aaKnown RBP8.57□□□□□ -1.04
DDX55-208ENST00000541259 ABHD17BQ5VST6 288 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 AGAP7PQ5VUJ5 663 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 IRAK1BP1Q5VVH5 260 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 PRAMEF8Q5VWM4 474 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 PRAMEF7Q5VXH5 474 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 BICRALQ6AI39 1079 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 OPN5Q6U736 354 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 COMTD1Q86VU5 262 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 ZNF227Q86WZ6 799 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 DHFR2Q86XF0 187 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 SLC30A8Q8IWU4 369 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 TMEM156Q8N614 296 aa8.57□□□□□ -1.04
DDX55-208ENST00000541259 FAM86B1Q8N7N1 296 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms