RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 LNX2Q8N448 690 aa14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 STK35Q8TDR2 534 aa14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 FOXRED1Q96CU9 486 aaPredicted RBP14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 ZBED3Q96IU2 234 aaPredicted RBP14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 MS4A4EQ96PG1 132 aa14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 C11orf54Q9H0W9 315 aaPredicted RBP14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 KLRF1Q9NZS2 232 aa14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 ZNF850A8MQ14 1090 aa14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 FAM155AB1AL88 458 aaPredicted RBP14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 LEFTY1O75610 366 aa14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 PFKMP08237 780 aa14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 PSMB1P20618 241 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 ZNF792Q3KQV3 632 aa14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 TP53I3Q53FA7 332 aa14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 NADSYN1Q6IA69 706 aa14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 RBM23Q86U06 439 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 NLRP8Q86W28 1048 aa14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 MYLIPQ8WY64 445 aa14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 ZBTB8AQ96BR9 441 aa14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 PITHD1Q9GZP4 211 aaPredicted RBP14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 NTN4Q9HB63 628 aa14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 PRTFDC1Q9NRG1 225 aa14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 CNIH4Q9P003 139 aa14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 ATG4BQ9Y4P1 393 aa14.14□□□□□ -0.15
SMARCA4-207ENST00000541122 C11orf98E9PRG8 122 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 LEFTY2O00292 366 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 PPP1R3DO95685 299 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 MTNR1BP49286 362 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 LMAN2Q12907 356 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 PGGHGQ32M88 737 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 CD276Q5ZPR3 534 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 ZNF585AQ6P3V2 769 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 MEPCEQ7L2J0 689 aaKnown RBP14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 LRFN1Q9P244 771 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 UBE2J1Q9Y385 318 aaPredicted RBP14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 NME7Q9Y5B8 376 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 COL2A1P02458 1487 aaPredicted RBP14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 PGCP20142 388 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 CBLP22681 906 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 SLC11A1P49279 550 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 IDH3GP51553 393 aaPredicted RBP14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 MLIPQ5VWP3 458 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 ADAMTS18Q8TE60 1221 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 MALSU1Q96EH3 234 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 CENPOQ9BU64 300 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 DDX31Q9H8H2 851 aaKnown RBP14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 ELOVL2Q9NXB9 296 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 GFOD1Q9NXC2 390 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 FAM230AA0A1W2PPH8 454 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 OIP5O43482 229 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 PTHP01270 115 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 PRSS56P0CW18 603 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 GRPRP30550 384 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 ID2Q02363 134 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 RBMS2Q15434 407 aaKnown RBP14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 PDSS1Q5T2R2 415 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 KIAA0319Q5VV43 1072 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 ZNF704Q6ZNC4 412 aaPredicted RBP14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 GAREM2Q75VX8 874 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 PDZD3Q86UT5 571 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 LAS2Q8IYD9 372 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 BOCQ9BWV1 1114 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 HOXD1Q9GZZ0 328 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 DMRT3Q9NQL9 472 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 MAN2C1Q9NTJ4 1040 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 DIMT1Q9UNQ2 313 aaKnown RBP14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 SULT1C4O75897 302 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 UBL3O95164 117 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 SLC34A2O95436 690 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 GGTA1PQ4G0N0 100 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 CLVS2Q5SYC1 327 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 ARHGAP12Q8IWW6 846 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 Q8N9G6 341 aaPredicted RBP14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 UHRF1Q96T88 793 aaPredicted RBP14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 PTGES2Q9H7Z7 377 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 TXNL4BQ9NX01 149 aaKnown RBP14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 POLHQ9Y253 713 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 CSNK1G3Q9Y6M4 447 aa14.13□□□□□ -0.15
SMARCA4-207ENST00000541122 TRIM64A6NGJ6 449 aa14.12□□□□□ -0.15
SMARCA4-207ENST00000541122 TRIM64BA6NI03 449 aa14.12□□□□□ -0.15
SMARCA4-207ENST00000541122 FZD7O75084 574 aa14.12□□□□□ -0.15
SMARCA4-207ENST00000541122 ZNF623O75123 536 aa14.12□□□□□ -0.15
SMARCA4-207ENST00000541122 PIM1P11309 404 aaPredicted RBP14.12□□□□□ -0.15
SMARCA4-207ENST00000541122 ZNF454Q8N9F8 522 aa14.12□□□□□ -0.15
SMARCA4-207ENST00000541122 PAQR8Q8TEZ7 354 aa14.12□□□□□ -0.15
SMARCA4-207ENST00000541122 FAM86C1Q9NVL1 165 aa14.12□□□□□ -0.15
SMARCA4-207ENST00000541122 PARPBPQ9NWS1 579 aa14.12□□□□□ -0.15
SMARCA4-207ENST00000541122 ZNF226Q9NYT6 803 aa14.12□□□□□ -0.15
SMARCA4-207ENST00000541122 COPS3Q9UNS2 423 aa14.12□□□□□ -0.15
SMARCA4-207ENST00000541122 RCE1Q9Y256 329 aa14.12□□□□□ -0.15
SMARCA4-207ENST00000541122 ADH1BP00325 375 aa14.12□□□□□ -0.15
SMARCA4-207ENST00000541122 ACPPP15309 386 aa14.12□□□□□ -0.15
SMARCA4-207ENST00000541122 ASAH1Q13510 395 aa14.12□□□□□ -0.15
SMARCA4-207ENST00000541122 HENMT1Q5T8I9 393 aaKnown RBP14.12□□□□□ -0.15
SMARCA4-207ENST00000541122 DHRS4L2Q6PKH6 230 aa14.12□□□□□ -0.15
SMARCA4-207ENST00000541122 SGPP2Q8IWX5 399 aa14.12□□□□□ -0.15
SMARCA4-207ENST00000541122 NINJ1Q92982 152 aa14.12□□□□□ -0.15
SMARCA4-207ENST00000541122 DPH1Q9BZG8 443 aa14.12□□□□□ -0.15
SMARCA4-207ENST00000541122 POLMQ9NP87 494 aaPredicted RBP14.12□□□□□ -0.15
SMARCA4-207ENST00000541122 SLC7A7Q9UM01 511 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms