RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 CCDC115Q96NT0 180 aa15.35■□□□□ 0.05
CD9-209ENST00000540891 PRDM14Q9GZV8 571 aa15.35■□□□□ 0.05
CD9-209ENST00000540891 DSN1Q9H410 356 aa15.35■□□□□ 0.05
CD9-209ENST00000540891 SDR39U1Q9NRG7 319 aaPredicted RBP15.35■□□□□ 0.05
CD9-209ENST00000540891 MED11Q9P086 117 aa15.35■□□□□ 0.05
CD9-209ENST00000540891 PPP4R1LQ9P1A2 415 aa15.35■□□□□ 0.05
CD9-209ENST00000540891 BTNL2Q9UIR0 455 aa15.35■□□□□ 0.05
CD9-209ENST00000540891 PCDHGB4Q9UN71 923 aa15.35■□□□□ 0.05
CD9-209ENST00000540891 FAF1Q9UNN5 650 aaPredicted RBP15.35■□□□□ 0.05
CD9-209ENST00000540891 PCDHGB3Q9Y5G1 929 aa15.35■□□□□ 0.05
CD9-209ENST00000540891 IGLV3-32A0A0A0MS00 114 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 ALG1L2C9J202 215 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 UBDO15205 165 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 TGDSO95455 350 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 ANGPTL1O95841 491 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 PGRP06401 933 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 KRT16P08779 473 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 GLI4P10075 376 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 TBXA2RP21731 343 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 UQCRC2P22695 453 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 CDKN2CP42773 168 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 GFRA1P56159 465 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 ART3Q13508 389 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 GSTA3Q16772 222 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 DCST2Q5T1A1 773 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 C1orf185Q5T7R7 199 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 TMEM211Q6ICI0 200 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 BHLHB9Q6PI77 547 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 SEM1Q6ZVN7 128 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 ULK2Q8IYT8 1036 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 VPS37AQ8NEZ2 397 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 OR4K17Q8NGC6 315 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 OR9I1Q8NGQ6 314 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 OR14L1PQ8NHC6 308 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 DUSP19Q8WTR2 217 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 CHMP6Q96FZ7 201 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 WDYHV1Q96HA8 205 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 TTYH2Q9BSA4 534 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 INPP5KQ9BT40 448 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 TBL1XR1Q9BZK7 514 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 SDHAF3Q9NRP4 125 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 ALKBH4Q9NXW9 302 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 TAS2R10Q9NYW0 307 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 ZIM2Q9NZV7 527 aa15.34■□□□□ 0.05
CD9-209ENST00000540891 MRPS18CQ9Y3D5 142 aaKnown RBP15.34■□□□□ 0.05
CD9-209ENST00000540891 NPIPA5A0A0B4J1W7 369 aa15.33■□□□□ 0.04
CD9-209ENST00000540891 KDM4EB2RXH2 506 aaPredicted RBP15.33■□□□□ 0.04
CD9-209ENST00000540891 NPIPA7E9PJI5 369 aa15.33■□□□□ 0.04
CD9-209ENST00000540891 SLC22A3O75751 556 aa15.33■□□□□ 0.04
CD9-209ENST00000540891 NPIPA8P0DM63 369 aa15.33■□□□□ 0.04
CD9-209ENST00000540891 MATN1P21941 496 aa15.33■□□□□ 0.04
CD9-209ENST00000540891 DPP4P27487 766 aa15.33■□□□□ 0.04
CD9-209ENST00000540891 GRNP28799 593 aaKnown RBP15.33■□□□□ 0.04
CD9-209ENST00000540891 LCN1P31025 176 aa15.33■□□□□ 0.04
CD9-209ENST00000540891 CASP9P55211 416 aa15.33■□□□□ 0.04
CD9-209ENST00000540891 DSCR4P56555 118 aaPredicted RBP15.33■□□□□ 0.04
CD9-209ENST00000540891 B3GALT5-AS1P59052 145 aa15.33■□□□□ 0.04
CD9-209ENST00000540891 PMPCAQ10713 525 aa15.33■□□□□ 0.04
CD9-209ENST00000540891 SAXO2Q658L1 398 aa15.33■□□□□ 0.04
CD9-209ENST00000540891 B3GNT6Q6ZMB0 384 aa15.33■□□□□ 0.04
CD9-209ENST00000540891 GLB1L3Q8NCI6 653 aaPredicted RBP15.33■□□□□ 0.04
CD9-209ENST00000540891 MIPOL1Q8TD10 442 aa15.33■□□□□ 0.04
CD9-209ENST00000540891 ABTB1Q969K4 478 aaPredicted RBP15.33■□□□□ 0.04
CD9-209ENST00000540891 SDCCAG3Q96C92 435 aa15.33■□□□□ 0.04
CD9-209ENST00000540891 SLC35G5Q96KT7 338 aa15.33■□□□□ 0.04
CD9-209ENST00000540891 OR52E6Q96RD3 313 aa15.33■□□□□ 0.04
CD9-209ENST00000540891 G6PC3Q9BUM1 346 aa15.33■□□□□ 0.04
CD9-209ENST00000540891 TCF7L2Q9NQB0 619 aa15.33■□□□□ 0.04
CD9-209ENST00000540891 DKKL1Q9UK85 242 aa15.33■□□□□ 0.04
CD9-209ENST00000540891 RNF6Q9Y252 685 aa15.33■□□□□ 0.04
CD9-209ENST00000540891 KLF2Q9Y5W3 355 aaPredicted RBP15.33■□□□□ 0.04
CD9-209ENST00000540891 PCNX1Q96RV3 2341 aa15.32■□□□□ 0.04
CD9-209ENST00000540891 NPIPB9F8W1W9 429 aa15.32■□□□□ 0.04
CD9-209ENST00000540891 ACTL6AO96019 429 aa15.32■□□□□ 0.04
CD9-209ENST00000540891 GABRA1P14867 456 aa15.32■□□□□ 0.04
CD9-209ENST00000540891 TCEA1P23193 301 aaKnown RBP15.32■□□□□ 0.04
CD9-209ENST00000540891 ADH7P40394 386 aa15.32■□□□□ 0.04
CD9-209ENST00000540891 MRPL19P49406 292 aaKnown RBP15.32■□□□□ 0.04
CD9-209ENST00000540891 CLK3P49761 638 aaKnown RBP15.32■□□□□ 0.04
CD9-209ENST00000540891 AQP5P55064 265 aa15.32■□□□□ 0.04
CD9-209ENST00000540891 C17orf67Q0P5P2 114 aa15.32■□□□□ 0.04
CD9-209ENST00000540891 CD226Q15762 336 aa15.32■□□□□ 0.04
CD9-209ENST00000540891 ACSF3Q4G176 576 aaPredicted RBP15.32■□□□□ 0.04
CD9-209ENST00000540891 ACAD11Q709F0 780 aa15.32■□□□□ 0.04
CD9-209ENST00000540891 IFNEQ86WN2 208 aa15.32■□□□□ 0.04
CD9-209ENST00000540891 GATSQ8NAP1 163 aa15.32■□□□□ 0.04
CD9-209ENST00000540891 CHDHQ8NE62 594 aaPredicted RBP15.32■□□□□ 0.04
CD9-209ENST00000540891 RND1Q92730 232 aa15.32■□□□□ 0.04
CD9-209ENST00000540891 NEURL3Q96EH8 262 aa15.32■□□□□ 0.04
CD9-209ENST00000540891 C1GALT1C1Q96EU7 318 aa15.32■□□□□ 0.04
CD9-209ENST00000540891 ZBTB18Q99592 522 aa15.32■□□□□ 0.04
CD9-209ENST00000540891 KLHDC3Q9BQ90 382 aa15.32■□□□□ 0.04
CD9-209ENST00000540891 CCDC28BQ9BUN5 200 aa15.32■□□□□ 0.04
CD9-209ENST00000540891 OR51I1Q9H343 314 aa15.32■□□□□ 0.04
CD9-209ENST00000540891 UBQLN4Q9NRR5 601 aa15.32■□□□□ 0.04
CD9-209ENST00000540891 RPH3AQ9Y2J0 694 aaPredicted RBP15.32■□□□□ 0.04
CD9-209ENST00000540891 MED12Q93074 2177 aa15.32■□□□□ 0.04
CD9-209ENST00000540891 PHF3Q92576 2039 aaKnown RBP15.31■□□□□ 0.04
CD9-209ENST00000540891 NBPF19A0A087WUL8 3843 aa15.31■□□□□ 0.04
CD9-209ENST00000540891 UQCRHLA0A096LP55 91 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms