RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 CBLCQ9ULV8 474 aa13.18□□□□□ -0.3
CYB561A3-216ENST00000540755 PPIEQ9UNP9 301 aaKnown RBP13.18□□□□□ -0.3
CYB561A3-216ENST00000540755 ZNF232Q9UNY5 417 aa13.18□□□□□ -0.3
CYB561A3-216ENST00000540755 ZNF443Q9Y2A4 671 aaPredicted RBP13.18□□□□□ -0.3
CYB561A3-216ENST00000540755 SAMHD1Q9Y3Z3 626 aaKnown RBP13.18□□□□□ -0.3
CYB561A3-216ENST00000540755 PCDHGA3Q9Y5H0 932 aa13.18□□□□□ -0.3
CYB561A3-216ENST00000540755 PCDHGA10Q9Y5H3 936 aa13.18□□□□□ -0.3
CYB561A3-216ENST00000540755 LYVE1Q9Y5Y7 322 aa13.18□□□□□ -0.3
CYB561A3-216ENST00000540755 AK5Q9Y6K8 562 aa13.18□□□□□ -0.3
CYB561A3-216ENST00000540755 MGAQ8IWI9 3026 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 FRG2CA6NGY1 282 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 PLD2O14939 933 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 TLX3O43711 291 aaPredicted RBP13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 STK17BO94768 372 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 CD63P08962 238 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 IL7RP16871 459 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 DRD5P21918 477 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 GPR143P51810 404 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 FOXL2P58012 376 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 PPP2R2BQ00005 443 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 SPIBQ01892 262 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 NCF4Q15080 339 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 EBPQ15125 230 aaKnown RBP13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 LIN52Q52LA3 116 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 EIPR1Q53HC9 387 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 FAAH2Q6GMR7 532 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 HMGN2P46Q86SG4 172 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 COMTD1Q86VU5 262 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 CYP4Z1Q86W10 505 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 MARVELD2Q8N4S9 558 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 GALNT6Q8NCL4 622 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 OR4N2Q8NGD1 307 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 OR4D11Q8NGI4 311 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 MAGEE2Q8TD90 523 aaPredicted RBP13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 ADIPOR1Q96A54 375 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 RBM4BQ9BQ04 359 aaKnown RBP13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 RBM4Q9BWF3 364 aaKnown RBP13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 SEMA4CQ9C0C4 833 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 FBXO34Q9NWN3 711 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 KLHL28Q9NXS3 571 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 ACAD8Q9UKU7 415 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 OR10H1Q9Y4A9 318 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 CHST2Q9Y4C5 530 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 U3KQV3 271 aa13.17□□□□□ -0.3
CYB561A3-216ENST00000540755 J3KTA2 159 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 M0R3H8 397 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 DLGAP1O14490 977 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 DLGAP3O95886 979 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 IGKV1D-16P01601 117 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 ALPLP05186 524 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 NID1P14543 1247 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 GTF2A1P52655 376 aaPredicted RBP13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 PSMD4P55036 377 aaKnown RBP13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 EEF1A1P68104 462 aaKnown RBP13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 PSPHP78330 225 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 PPP1R8Q12972 351 aaKnown RBP13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 BLMHQ13867 455 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 RTP5Q14D33 572 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 FLYWCH1Q4VC44 716 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 OTUD3Q5T2D3 398 aaPredicted RBP13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 RNF220Q5VTB9 566 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 TCTN3Q6NUS6 607 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 ZNF836Q6ZNA1 936 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 CPEB2Q7Z5Q1 589 aaKnown RBP13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 LACC1Q8IV20 430 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 C9orf40Q8IXQ3 194 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 CACTIN-AS1Q8N1I8 211 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 BCORP1Q8N888 145 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 C17orf47Q8NEP4 570 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 NFAM1Q8NET5 270 aaPredicted RBP13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 OR4C15Q8NGM1 316 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 WDR36Q8NI36 951 aaKnown RBP13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 OIT3Q8WWZ8 545 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 LCORQ96JN0 433 aaPredicted RBP13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 DHRS1Q96LJ7 313 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 RDH12Q96NR8 316 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 SPRY4Q9C004 299 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 NRSN2Q9GZP1 204 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 EVA1AQ9H8M9 152 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 SMPD3Q9NY59 655 aaPredicted RBP13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 TESMINQ9Y4I5 508 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 MAGED1Q9Y5V3 778 aaPredicted RBP13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 C2orf92A0A1B0GVN3 265 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 C9orf172C9J069 976 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 TNFRSF11BO00300 401 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 PCDH17O14917 1159 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 TO15178 435 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 UGT2B17O75795 530 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 YAP1P46937 504 aaKnown RBP13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 LIMS1P48059 325 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 HMGA2P52926 109 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 EPS8Q12929 822 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 MAPK14Q16539 360 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 DECR1Q16698 335 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 NHSL2Q5HYW2 709 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 HLA-DQA1Q5Y7H0 255 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 FAM199XQ6PEV8 388 aaPredicted RBP13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 PAPD4Q6PIY7 484 aaKnown RBP13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 C6orf15Q6UXA7 325 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms