RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 GMFGO60234 142 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 ZIC3O60481 467 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 TOXO94900 526 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 OXSR1O95747 527 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-212ENST00000540230 KIR3DL1P43629 444 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 GFRA1P56159 465 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.68□□□□□ -0.22
UBE3B-212ENST00000540230 ACSF3Q4G176 576 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-212ENST00000540230 GATSQ8NAP1 163 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 OR4K17Q8NGC6 315 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 OR56A1Q8NGH5 318 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 DUSP19Q8WTR2 217 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 CHMP6Q96FZ7 201 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 STACQ99469 402 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 KLHDC3Q9BQ90 382 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 ACTRT3Q9BYD9 372 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 UCK2Q9BZX2 261 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 VIPAS39Q9H9C1 493 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 DUSP22Q9NRW4 184 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 COQ3Q9NZJ6 369 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 Q9UFV3 132 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 CAMK2AQ9UQM7 478 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 PCDHGB3Q9Y5G1 929 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 NAV2Q8IVL1 2488 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 NPIPA5A0A0B4J1W7 369 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 RNF103-CHMP3A0A140T963 221 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 FAM90A27PA6NNH2 459 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 E9PBE3 544 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 NPIPA7E9PJI5 369 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 ANGPTL1O95841 491 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 NPIPA8P0DM63 369 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 GABRA1P14867 456 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 DPP4P27487 766 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 STARP49675 285 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 DGKQP52824 942 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 CASP9P55211 416 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 B3GALT5-AS1P59052 145 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 POU6F2P78424 691 aaPredicted RBP13.67□□□□□ -0.22
UBE3B-212ENST00000540230 FAM174BQ3ZCQ3 159 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 NXNQ6DKJ4 435 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 PLXDC2Q6UX71 529 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 SPATA19Q7Z5L4 167 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 IFNEQ86WN2 208 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 LIX1LQ8IVB5 337 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 OR4A15Q8NGL6 344 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 OR10Q1Q8NGQ4 319 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 CA5BP1Q8WTZ4 195 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 OR7D2Q96RA2 312 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 BTBD2Q9BX70 525 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 TBL1XR1Q9BZK7 514 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 GIN1Q9NXP7 522 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 DKKL1Q9UK85 242 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 MAST4O15021 2626 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 CSMD1Q96PZ7 3565 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 HCFC1P51610 2035 aa13.67□□□□□ -0.22
UBE3B-212ENST00000540230 PKDREJQ9NTG1 2253 aa13.66□□□□□ -0.22
UBE3B-212ENST00000540230 NKX2-6A6NCS4 301 aa13.66□□□□□ -0.22
UBE3B-212ENST00000540230 ALG1L2C9J202 215 aa13.66□□□□□ -0.22
UBE3B-212ENST00000540230 SLCO1B7G3V0H7 640 aa13.66□□□□□ -0.22
UBE3B-212ENST00000540230 CPSF4O95639 269 aaKnown RBP13.66□□□□□ -0.22
UBE3B-212ENST00000540230 CHRNB4P30926 498 aa13.66□□□□□ -0.22
UBE3B-212ENST00000540230 RNF144AP50876 292 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-212ENST00000540230 ACAD11Q709F0 780 aa13.66□□□□□ -0.22
UBE3B-212ENST00000540230 OLIG3Q7RTU3 272 aa13.66□□□□□ -0.22
UBE3B-212ENST00000540230 C6orf120Q7Z4R8 191 aa13.66□□□□□ -0.22
UBE3B-212ENST00000540230 NAXEQ8NCW5 288 aa13.66□□□□□ -0.22
UBE3B-212ENST00000540230 OR5M1Q8NGP8 315 aa13.66□□□□□ -0.22
UBE3B-212ENST00000540230 ADAMTS15Q8TE58 950 aa13.66□□□□□ -0.22
UBE3B-212ENST00000540230 C7orf26Q96N11 449 aa13.66□□□□□ -0.22
UBE3B-212ENST00000540230 FAF1Q9UNN5 650 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-212ENST00000540230 USH1CQ9Y6N9 552 aa13.66□□□□□ -0.22
UBE3B-212ENST00000540230 FBN2P35556 2912 aa13.66□□□□□ -0.22
UBE3B-212ENST00000540230 PRSS51A0A1B0GVH4 220 aa13.65□□□□□ -0.22
UBE3B-212ENST00000540230 HMGB1P1B2RPK0 211 aaPredicted RBP13.65□□□□□ -0.22
UBE3B-212ENST00000540230 ACTL6AO96019 429 aa13.65□□□□□ -0.22
UBE3B-212ENST00000540230 SNRPB2P08579 225 aaKnown RBP13.65□□□□□ -0.22
UBE3B-212ENST00000540230 PRF1P14222 555 aa13.65□□□□□ -0.22
UBE3B-212ENST00000540230 TBXA2RP21731 343 aa13.65□□□□□ -0.22
UBE3B-212ENST00000540230 ZFP36L2P47974 494 aaKnown RBP13.65□□□□□ -0.22
UBE3B-212ENST00000540230 LHX2P50458 406 aa13.65□□□□□ -0.22
UBE3B-212ENST00000540230 CLNS1AP54105 237 aaKnown RBP13.65□□□□□ -0.22
UBE3B-212ENST00000540230 DSCR4P56555 118 aaPredicted RBP13.65□□□□□ -0.22
UBE3B-212ENST00000540230 CD226Q15762 336 aa13.65□□□□□ -0.22
UBE3B-212ENST00000540230 DCST2Q5T1A1 773 aa13.65□□□□□ -0.22
UBE3B-212ENST00000540230 PM20D2Q8IYS1 436 aa13.65□□□□□ -0.22
UBE3B-212ENST00000540230 TNIP2Q8NFZ5 429 aa13.65□□□□□ -0.22
UBE3B-212ENST00000540230 LILRB4Q8NHJ6 448 aa13.65□□□□□ -0.22
UBE3B-212ENST00000540230 LRRC8CQ8TDW0 803 aa13.65□□□□□ -0.22
UBE3B-212ENST00000540230 ACTRT2Q8TDY3 377 aa13.65□□□□□ -0.22
UBE3B-212ENST00000540230 MOAP1Q96BY2 351 aa13.65□□□□□ -0.22
UBE3B-212ENST00000540230 SFXN2Q96NB2 322 aa13.65□□□□□ -0.22
UBE3B-212ENST00000540230 NPAS1Q99742 590 aa13.65□□□□□ -0.22
UBE3B-212ENST00000540230 G6PC3Q9BUM1 346 aa13.65□□□□□ -0.22
UBE3B-212ENST00000540230 MRPS18CQ9Y3D5 142 aaKnown RBP13.65□□□□□ -0.22
UBE3B-212ENST00000540230 IGLV3-32A0A0A0MS00 114 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 AHRRA9YTQ3 701 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 SHISA8B8ZZ34 492 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 DIAPH2O60879 1101 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 EPPINO95925 133 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 NGFRP08138 427 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms